Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2276 ATGGCTATTGCAGCAGCAGCTGTCGTTGTGCCATTGGGCCTGCTCTTCTTCGCCTCTGGCCTCATTGTTAATCTCATGCAGGCAATATCTTATGTCCTTGTACGGCCACTCTCGAAGAATTTGCATAGACGGATCAACCGTGTAGTTGCAGAATTGTTGTGGCTGGAACTCATATGGCTTATTGATTGGTGGGCAGGAGTTAAGGTTCAAGTATTTACAGATCATGAAACCTTTCATTTGATGGGTAAAGAGCATGCACTTGTTATATGCAATCACAAAAGTGATATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTTGGGAGTGCATTAGCTGTGATGAAGAAATCATCCAAGCTTCTGCCAGTCATTGGTTGGTCAATGTGGTTTTCTGAGTACCTTTTTCTGGAGAGAAGTTGGGCCAAGGATGAGAACACATTAAAGTCAGGTATCCAGCGACTGAGTGATTTCCCTCTTCCGTTTTGGTTGGCTCTTTTTGTTGAAGGAACACGCTTTACACAAGCTAAACTATCAGCTGCCCAGGAATATGCAACCTCCACTGGATTGCCTGTTCCTAGAAACGTTTTGATTCCTAGAACTAAGGGGTTTGTTTCGGCAGTAAGCCATATGCGTTCATTTGTTCCTGCCATTTATGATATAACGGTGGCTATCCCTAAGAGTTCACCTGCTCCTACAATGCTTAGACTCTTAAAGGGGCAACCCTCACTGGTGCAAGTTCATATCAAGCGCCATTTGATGAATGAATTGCCGAAAACAGATGAAGCTGTTGCTCAATGGTGTCGAGATGCATTTGTAACCAAGGATGCATTGTTAGACAAACATAAAGCTGAGGATACTTTTAGTGACCAAGAGCTGCAGGAGACTGGTCGGCCAGTAAAGTCTCTTCTGGTAGTCATATCTTGGGCTTGTCTGGTTGTTGCGGGGTTTGTGAAGTTCCTCAAGTGGTCTTCACTGCTATCATCATGGAAGGGTGTTTGTTTTTCGACTTTTGCTTTGCTAGTTGTTACTGGCCTCATGCACGTCTTGATTCAATTCTCACAGTCGGAGCGTTCAATGCCAGCCAAGGTTGCCTCTGCGAAGCCGAAGAACAAGGGAGAAGAACTGGCTGCAAGGAATGACAAACAACAGTAG 1164 0.4493 MAIAAAAVVVPLGLLFFASGLIVNLMQAISYVLVRPLSKNLHRRINRVVAELLWLELIWLIDWWAGVKVQVFTDHETFHLMGKEHALVICNHKSDIDWLVGWVLAQRSGCLGSALAVMKKSSKLLPVIGWSMWFSEYLFLERSWAKDENTLKSGIQRLSDFPLPFWLALFVEGTRFTQAKLSAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDITVAIPKSSPAPTMLRLLKGQPSLVQVHIKRHLMNELPKTDEAVAQWCRDAFVTKDALLDKHKAEDTFSDQELQETGRPVKSLLVVISWACLVVAGFVKFLKWSSLLSSWKGVCFSTFALLVVTGLMHVLIQFSQSERSMPAKVASAKPKNKGEELAARNDKQQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2276 387 MobiDBLite consensus disorder prediction 362 387 - -
Dod01g2276 387 SMART plsc_2 86 208 IPR002123 GO:0016746
Dod01g2276 387 Pfam Acyltransferase 83 228 IPR002123 GO:0016746
Dod01g2276 387 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Dod01g2276 387 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 43 181 - -
Dod01g2276 387 MobiDBLite consensus disorder prediction 371 387 - -
Dod01g2276 387 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 376 - -
Dod01g2276 387 CDD LPLAT_LCLAT1-like 62 253 - -
Dod01g2276 387 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2276 Dod-Chr1 60615603 60622848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2276 3 375 Miscellaneous Gene Families AT3G57650 74.799 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2276 K13523 - gmx:100792858 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2276 01 60615603 60622848 Dod01g2276 01 60615603 60622848 ECH
Dod01g2276 01 60615603 60622848 Dod07g1199 07 31081897 31096785 PCT