Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2274 ATGAGCATCTCATCCCTTACCTTCGATTCCCACACACTCTTCAACCCTCAGCGCCCTTCCTCCTCCTCCTATTCCTTCCTCCTCCGCCACACCCCGCCCCGAACCCTCGTGGTCTGCTCCGCCGCCAAGCCCGTCGCCCCTCCTCCTCCCAAGCTCAGCACCGCCGCCTCCTCCTCCGGTCGAATCGGGTCCCTCAGCCAGGTCTCCGGCGTTCTTGGCTGCCAGTGGGGCGATGAGGGCAAAGGCAAGCTCGTTGACATCTTAGCCCAACACTTCGAAATCGTTGCCCGTTGTCAGGGTGGGGCTAATGCTGGGCATACCATTTATAATGCAGAAGGGAAAAAATTTGCCCTTCATCTTGTTCCTTCTGGTATTCTCAATGGGGATACTCTGTGTGTTATTGGGAATGGGGTTGTGGTGCATCTGCCTGGGCTGTTCAAGGAAATTGATGGCCTTGAATCGAATGGGGTCTCTTGCAAGGGAAGGATTTTGATATCTGATCGCGCTCACCTGTTGTTTGATTTCCACCAAGCAGTGGATGGACTAAGAGAAGCCGAGCTCGCTAAATCTTTCATCGGCACAACCAAGAGAGGCATTGGGCCGTGCTACTCCAGCAAGGTTAACCGAAATGGCATTAGGGTAGGTGATTTGAGGCATATGGATACTTTCCCTCAGAAACTTGATCTTTTGTTAGCAGATGCAGCGGCAAGGTTCAAAGATTTTAAATATGGTCCGGACGTGGTCAGTGAAGAGGTTGAAAAATACAAGAGATATGCTGAGAGGTTGGAACCGTTTATTGCTGATACTGTGCATGTCATCAATGATGCTATAACACAGAAGAAGAAGATTCTAGTTGAAGGAGGTCAAGCAACCATGTTGGACGTTGATTTTGGAACTTATCCTTTTGTTACTTCGTCCAGCCCATCAGCAGGTGGGATATGCACTGGTCTTGGTATTGCTCCAAGAGTTGTTGGTGATCTAATAGGAGTGGTGAAAGCATACACTACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATTTTGGGGCCAGGAGGTGATCTTCTTAGATTTGCTGGTCAGGAGTTTGGCACAACCACTGGCCGTCCTCGACGGTGTGGTTGGCTCGATATAGTTGCATTAAGATACTCCTGTCAGATCAATGGTTTTTCATCACTGAATCTCACCAAGCTTGATGTTCTATCTGATCTTGATACGATACAGTTAGGTGTCTCCTATAAACATGTTGATGGTACACCAATCAAATCATTCCCTTCAGATCTCCGCCTTCTTGAACAATTGAAGGTGGAATATGAAACACTTCCTGGATGGAAGTCTGATATTTCTTCCATCAGAAATTATTCTGACCTTCCAAAAGCTGCACGGGAGTATGTGGAAAGGATAGAAGAACTTGTTGGTGTCCCTATCCACTACATTGGTGTTGGGCCTGGGCGTGATGCCCTCATATACAAGTGA 1473 0.4807 MSISSLTFDSHTLFNPQRPSSSSYSFLLRHTPPRTLVVCSAAKPVAPPPPKLSTAASSSGRIGSLSQVSGVLGCQWGDEGKGKLVDILAQHFEIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNGDTLCVIGNGVVVHLPGLFKEIDGLESNGVSCKGRILISDRAHLLFDFHQAVDGLREAELAKSFIGTTKRGIGPCYSSKVNRNGIRVGDLRHMDTFPQKLDLLLADAAARFKDFKYGPDVVSEEVEKYKRYAERLEPFIADTVHVINDAITQKKKILVEGGQATMLDVDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGPGGDLLRFAGQEFGTTTGRPRRCGWLDIVALRYSCQINGFSSLNLTKLDVLSDLDTIQLGVSYKHVDGTPIKSFPSDLRLLEQLKVEYETLPGWKSDISSIRNYSDLPKAAREYVERIEELVGVPIHYIGVGPGRDALIYK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2274 490 Pfam Adenylosuccinate synthetase 71 488 IPR001114 GO:0000166|GO:0004019|GO:0006164
Dod01g2274 490 PANTHER ADENYLOSUCCINATE SYNTHETASE, CHLOROPLASTIC 29 490 - -
Dod01g2274 490 PANTHER ADENYLOSUCCINATE SYNTHETASE 29 490 IPR001114 GO:0000166|GO:0004019|GO:0006164
Dod01g2274 490 Hamap Adenylosuccinate synthetase [purA]. 1 490 IPR001114 GO:0000166|GO:0004019|GO:0006164
Dod01g2274 490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 489 IPR027417 -
Dod01g2274 490 TIGRFAM purA: adenylosuccinate synthase 71 488 IPR001114 GO:0000166|GO:0004019|GO:0006164
Dod01g2274 490 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 167 265 IPR042110 -
Dod01g2274 490 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 71 330 IPR042109 -
Dod01g2274 490 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 75 82 IPR018220 GO:0005525
Dod01g2274 490 SMART adenylsucc_synt 68 489 IPR001114 GO:0000166|GO:0004019|GO:0006164
Dod01g2274 490 CDD AdSS 67 489 IPR001114 GO:0000166|GO:0004019|GO:0006164
Dod01g2274 490 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 331 490 IPR042111 -
Dod01g2274 490 ProSitePatterns Adenylosuccinate synthetase active site. 198 209 IPR033128 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2274 K01939 - gmx:100792329 858.981