Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2259 ATGACGGTGACACCAAAGATCTCAGTTAATGACGGGAACCTGGTTGTCCATGGGAAGACCTTACTGACTGGGGTGCCGGACAACGTTGTGCTGACCCCAGGAGCAGGAAAGGGGCTTGTGGCTGGTGCATTCGTTGGTGCCACAGCTCCCCACAGCAAAAGCCTCCATGTGTTTCCCATGGGTGTCTTGGAGGGGCTCCGGTTCATGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACTCAGAGAATGGGAACATGTGGAAGGGATGTTCCTCTGGAGACACAGTTCATGCTTATTGAGAGCAAAGACAGTGAAGATGATTCCCCAACCATCTATACTGTCTTGCTTCCTCTCCTTGAAGGCCAATTCCGTGCTGTCCTACAAGGCAATGACAAAAACGAGATAGAGATTTGTTCGGAGAGTGGAGATGGTGATGTTGTAACCAGTCAAGGCCTTAACCTTGTCTACATGCATGCTGGGACTAACCCCTTTGAAGTCATCAACCAAGCAGTCAAGGCTGTGGAAAAACATATGCAAACTTTTCTTCACCTTGAGAAGAAAAGATTGCCATCTTTTCTTGACTGGTTTGGGTGGTGCACATGGGATGCTTTCTATACTGATGTCACAGCTGAGGGTGTTGAGGAAGGCCTGAAAAGTCTATCAGAGGGGGGTACACCTCCACGGTTCCTCATCATAGATGATGGCTGGCAACAGATTGAATGTAAACCAAAGGATGCTGATTGTGTCGTACAAGAAGGAGCGCAGTTTGCTACTAGGTTGACTGGCATTAAAGAGAATGTAAAATTTCAGAAGAATGGACAGAACAGTGAACAGATCTCAGGCCTGAAGCATGTTGTAGACGGAGCAAAGAACCATCACAACGTGAAAAATGTTTATGTATGGCATGCTCTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCAGCTGGCATGGAGCACTATGACACTTCCTTGGCATACCCGGTTCAGTCTCCGGGTGTACTAGGGAACCAACCCGACATTGTCATGGACAGCTTAGCTGTACATGGCCTCGGCCTAGTGCATCCAAAGAAGGTTTTCAACTTCTACAATGAGCTCCATGCTTACTTGGCTTCAAGTGGAGTAGATGGAGTGAAGGTTGATGTGCAGAACATCATTGAGACCCTCGGTGCAGGGCATGGTGGTAGAGTCTCACTCACACGCAGCTATCATCACGCCCTCGAGGCATTCCATCGCTCGAAACTTCCCTGA 1251 0.486 MTVTPKISVNDGNLVVHGKTLLTGVPDNVVLTPGAGKGLVAGAFVGATAPHSKSLHVFPMGVLEGLRFMCCFRFKLWWMTQRMGTCGRDVPLETQFMLIESKDSEDDSPTIYTVLLPLLEGQFRAVLQGNDKNEIEICSESGDGDVVTSQGLNLVYMHAGTNPFEVINQAVKAVEKHMQTFLHLEKKRLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIECKPKDADCVVQEGAQFATRLTGIKENVKFQKNGQNSEQISGLKHVVDGAKNHHNVKNVYVWHALAGYWGGVKPAAAGMEHYDTSLAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASSGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHHALEAFHRSKLP* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2259 416 Pfam Raffinose synthase or seed imbibition protein Sip1 7 409 IPR008811 -
Dod01g2259 416 Gene3D Aldolase class I 194 415 IPR013785 -
Dod01g2259 416 PANTHER - 1 384 IPR008811 -
Dod01g2259 416 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 384 - -
Dod01g2259 416 SUPERFAMILY (Trans)glycosidases 191 408 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2259 Dod-Chr1 60351346 60354135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2259 1 409 Glycoside Hydrolase AT3G57520 80.630 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2259 K06617 - gmx:100807861 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2259 01 60351346 60354135 Dod01g2259 01 60351346 60354135 ECH