Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2242 ATGTCCAGTGCTACGAAAGTTTTGGATCCAGCATTCCAGGGAGCAGGTCAAAAAGTAGGTTCCGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCATTGCCCAAATCTGACTATGGGAAATTCTACATGGGAGATTCTTACATCATCTTGCAGACAACACAAGGCAAAGGAGGCACTTATTTCTATGACATTCACTTTTGGATTGGAAAGGATACAAGTCAGGATGAGGCTGGAACAGCTGCCATTAAAACTGTTGAACTTGATGCATCTCTTGGAGGGCGTGCTGTGCAGCACAGGGAAATCCAAGGGCATGAATCTGACAAATTTTTGTCATACTTCAAGCCATGTATAATACCATTAGAGGGGGGTGTTGCATCTGGATTTAAAAAACCTGAAGAGGAGGAGTTTGAAACACGTTTATATGTATGCAAAGGAAAACGAGTTGTCAGAATGAAACAGGTCCCTTTTGCACGGTCTTCACTGAATCATGATGATGTATTTATCCTAGACACTCAGAATAAGATTTATCAATTCAATGGAGCTAATTCCAGTATTCAGGAAAGAGCCAAGGCTTTGGAAGTTATTCAGTTTCTGAAGGAAAAGTATCATGAAGGGAAATGCAATGTTGCAATTGTTGATGATGGAAAGTTGGACACTGAGTCAGACTCGGGTGAATTTTGGGTCCTCTTTGGTGGCTTTGCTCCTATTGGCAAAAAAGTAATCAGTGAGGATGATATCATTCCTGAGACCATTCCTGCTCAACTCTATAGTATTGCTAATGGTGAGGTCAAGTCTGTAGAAGGTGAACTTTCTAAATCACTGCTGGAGAACAACAAATGCTATTTATTGGACTGTGGTGCTGAGGTATTTGTCTGGGTTGGCCGGGTAACGCAAGTTGAAGAACGTAAAGCAGCTTGTCAAGCAGCCGAGGAGTTTGTTACAAGTCAAAAAAGGCCAAAATCTACAAGGATAACCAGGGTCATTCAAGGTTATGAGCCTCATTCTTTTAAGTCCAACTTTGATTCTTGGCCATCGGGATCTACTACTACTGGTGCTGAGGAAGGAAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGTATGGGTGTCAAAGGAATCACAAAAGGTACCCCAGTTAATGAGGAAATCCCACCTTTGCTTGAAGCAGGTGGAAAGATGGAGGTATGGCAAATCAATGGAAGCGCTAAGACTCCGTTAGCTAAGGAGGATATTGGTAAATTTTATAGTGGAGATTGTTACATAGTAGTGTACACTTATCACTCTGGTGAGAGGAAGGAAGACTACTACTTGTGCTGTTGGTTTGGCAAAGACAGCATTGAGGAGGACCAAAAGATGGCTACCCGATTGGCCAATACAATGTTCAGCTCATTAAAGGGTAGACCTGTTCAGGGCCGCATATTTGAAGGTAAAGAGCCACCACAGTTTGTTGCTCTTTTCCAACCTATGGTGATTCTCAAGGGAGGTTTGAGCTCTGGTTACAAAAAGATGTTAGCAGATAAAGGTTTGCAAGATGAGACATACACAGCAGAGAGTATTGCACTTATTCGGATTTCTGGAACGTCCATTCATAATAATAAAGTAGTGCAAGTTGATGCAGTGGCAACATCATTGAATTCTGCCGAGTGCTTTGTCCTACAATCTGGCTCAACAATTTTCACTTGGCACGGCAATCAATCTTCCTTTGAGCAGCAGCAGCTAGCAGCAAAAGTTGCTGAATTTTTAAGGCCAGGAGTTGCTTTAAAACATGCTAAAGAAGGAACAGAAAGCTCAGCTTTCTGGTTTGCTGTTGGTGGAAAACAGAGTTACACCAGCAAAAAAGTCACTAATGACATTGTCAGAGACCCACATTTGTTCACTTTCTCATTCAATAGAGGAAAGTTACAGGTTGAGGAGGTTCACAACTTTTCTCAAGATGATTTGTTACCGGAGGATATCCTCATACTTGACACGCATGCTGAAGTGTTTGTTTGGATTGGCCAGTGTGTGGACCCAAAAGAAAAGCAAAATGCTTTTGAAATTGGCCAGAAATACATAGATAAGGCTGCATCTCTGGAGGGATTATCTCCTCATGTACCTCTGTATAAAGTAACAGAAGGGAACGAACCTTGCTTTTTCACAACATACTTTTCTTGGGACCATGCAAAAGCTACGGTTCAAGGGAACTCATTCCAGAAAAAGGTGGCATTACTCTTTGGGTTTGGCCATGCTGTAGAGGAAAAGTCTAATGGATCAAGTCAAGGGGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCCTTATCAAACGCATTCGGTTCATCCTCTGAGACAGCATCCAGCATGACACAGGATAGATTGAATGGGTTAAATCAAGGAGGACCAAGACAAAGGGCAGAAGCTTTAGCTGCCTTAAACTCTGCATTTAATTCATCACCTGGGACTAAAAATTTCACTCCCAGGCCATCTGGAAGAAGTCAAGGCTCACAAAGGGCAGCAGCAGTTGCTGCTCTTTCTTCAGTTCTTACTGCTGAAAAGAAGAAACAATCACCTGATGCTTCTCCTGTGGCAGGCAGTAGTCCTGTTGTGGAAAGTAGCACTTCTGATGCTAAAAGTGAAAGTGCACATTCTGAGACAGAAGGTACTGAAGAAGTTGCAGAAATCAAGGAGACAGAAGAATCTGCTCCTGAAACTGGTAGCAATGGGGATTCAGAATCAAAACAAGAAAATGTTGAGGATGGGGATGATAGTCAAAGCAGTCAAACTGTGTTCAGTTATGAGCAATTAAAGGCTAAATCTGGTAGTCGTCTGTCTGGAATTGATCTTAAACGTAGAGAGGCCTATCTATCTGATAAAGAATTTGAAACTGTATTTGGAATGACAAAAGAAGCATTCTCTAAATTGCCAAGATGGAAGCAAGACATGCTGAAAAAGAAACATGATCTGTTCTAA 2949 0.4198 MSSATKVLDPAFQGAGQKVGSEIWRIENFQPVPLPKSDYGKFYMGDSYIILQTTQGKGGTYFYDIHFWIGKDTSQDEAGTAAIKTVELDASLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEEFETRLYVCKGKRVVRMKQVPFARSSLNHDDVFILDTQNKIYQFNGANSSIQERAKALEVIQFLKEKYHEGKCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIIPETIPAQLYSIANGEVKSVEGELSKSLLENNKCYLLDCGAEVFVWVGRVTQVEERKAACQAAEEFVTSQKRPKSTRITRVIQGYEPHSFKSNFDSWPSGSTTTGAEEGRGKVAALLKQQGMGVKGITKGTPVNEEIPPLLEAGGKMEVWQINGSAKTPLAKEDIGKFYSGDCYIVVYTYHSGERKEDYYLCCWFGKDSIEEDQKMATRLANTMFSSLKGRPVQGRIFEGKEPPQFVALFQPMVILKGGLSSGYKKMLADKGLQDETYTAESIALIRISGTSIHNNKVVQVDAVATSLNSAECFVLQSGSTIFTWHGNQSSFEQQQLAAKVAEFLRPGVALKHAKEGTESSAFWFAVGGKQSYTSKKVTNDIVRDPHLFTFSFNRGKLQVEEVHNFSQDDLLPEDILILDTHAEVFVWIGQCVDPKEKQNAFEIGQKYIDKAASLEGLSPHVPLYKVTEGNEPCFFTTYFSWDHAKATVQGNSFQKKVALLFGFGHAVEEKSNGSSQGGPRQRAEALAALSNAFGSSSETASSMTQDRLNGLNQGGPRQRAEALAALNSAFNSSPGTKNFTPRPSGRSQGSQRAAAVAALSSVLTAEKKKQSPDASPVAGSSPVVESSTSDAKSESAHSETEGTEEVAEIKETEESAPETGSNGDSESKQENVEDGDDSQSSQTVFSYEQLKAKSGSRLSGIDLKRREAYLSDKEFETVFGMTKEAFSKLPRWKQDMLKKKHDLF* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2242 982 MobiDBLite consensus disorder prediction 842 869 - -
Dod01g2242 982 Pfam Villin headpiece domain 947 982 IPR003128 GO:0003779|GO:0007010
Dod01g2242 982 Gene3D Severin 614 736 IPR029006 -
Dod01g2242 982 Gene3D Severin 388 517 IPR029006 -
Dod01g2242 982 SUPERFAMILY Actin depolymerizing proteins 383 528 - -
Dod01g2242 982 MobiDBLite consensus disorder prediction 870 895 - -
Dod01g2242 982 MobiDBLite consensus disorder prediction 772 924 - -
Dod01g2242 982 CDD gelsolin_S2_like 139 232 - -
Dod01g2242 982 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Dod01g2242 982 Pfam Gelsolin repeat 267 337 IPR007123 -
Dod01g2242 982 Pfam Gelsolin repeat 532 583 IPR007123 -
Dod01g2242 982 Pfam Gelsolin repeat 637 713 IPR007123 -
Dod01g2242 982 Pfam Gelsolin repeat 149 217 IPR007123 -
Dod01g2242 982 Pfam Gelsolin repeat 29 111 IPR007123 -
Dod01g2242 982 Pfam Gelsolin repeat 409 483 IPR007123 -
Dod01g2242 982 PANTHER VILLIN-3-LIKE ISOFORM X1 1 982 - -
Dod01g2242 982 MobiDBLite consensus disorder prediction 772 790 - -
Dod01g2242 982 CDD gelsolin_S4_like 386 487 - -
Dod01g2242 982 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Dod01g2242 982 ProSiteProfiles Headpiece (HP) domain profile. 917 982 IPR003128 GO:0003779|GO:0007010
Dod01g2242 982 Gene3D Severin 248 357 IPR029006 -
Dod01g2242 982 Gene3D Severin 518 613 IPR029006 -
Dod01g2242 982 SMART VILL_6 624 719 IPR007122 GO:0051015
Dod01g2242 982 SMART VILL_6 19 117 IPR007122 GO:0051015
Dod01g2242 982 SMART VILL_6 137 234 IPR007122 GO:0051015
Dod01g2242 982 SMART VILL_6 518 607 IPR007122 GO:0051015
Dod01g2242 982 SMART VILL_6 251 344 IPR007122 GO:0051015
Dod01g2242 982 SMART VILL_6 392 490 IPR007122 GO:0051015
Dod01g2242 982 CDD gelsolin_S5_like 519 609 - -
Dod01g2242 982 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Dod01g2242 982 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Dod01g2242 982 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Dod01g2242 982 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Dod01g2242 982 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Dod01g2242 982 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Dod01g2242 982 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Dod01g2242 982 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Dod01g2242 982 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Dod01g2242 982 SUPERFAMILY Actin depolymerizing proteins 511 615 - -
Dod01g2242 982 CDD gelsolin_S3_like 254 343 - -
Dod01g2242 982 SUPERFAMILY VHP, Villin headpiece domain 918 982 IPR036886 GO:0003779|GO:0007010
Dod01g2242 982 Gene3D Villin headpiece domain 901 982 IPR036886 GO:0003779|GO:0007010
Dod01g2242 982 SMART VHP_1 947 982 IPR003128 GO:0003779|GO:0007010
Dod01g2242 982 CDD gelsolin_S6_like 622 720 - -
Dod01g2242 982 Gene3D Severin 133 246 IPR029006 -
Dod01g2242 982 Gene3D Severin 5 132 IPR029006 -
Dod01g2242 982 PANTHER VILLIN 1 982 IPR007122 GO:0051015
Dod01g2242 982 CDD gelsolin_S1_like 12 124 - -
Dod01g2242 982 MobiDBLite consensus disorder prediction 803 835 - -
Dod01g2242 982 SUPERFAMILY Actin depolymerizing proteins 596 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2242 Dod-Chr1 60089714 60101673 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2242 - - gmx:100787208 1690.63