Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2237 ATGGAGTTGCTGGGTGATGCTGTAGATAATAATAAGAGGGAAGAAGTGTGTTTGGTTTGGGAAGGCTTGACAGTGGTTAGCACTAGTCCAAGGAAGAACCTCTTAAGTGGGTTAAGTGGTTATGCTGAACCAAACAGGATCATGGCTCTCATTGGCCCTTCAGGTGCTGGCAAATCCACCTTACTTGATGCACTTGCTGGAAGACTTCCCACCAATGTTAGCATGACTGGAAATGTGTTGCTCAATGGGACGAAGAGAAGTACAAGCTGCAGAGATATTTCTTATGTTACCCAAGAAGATTACTTCTTGGGAACTCTAACAGTGAGGGAAACCCTCACATATGCTGCTCATTTGAGACTTCCTTCCAACATGACTAGAGATGATATTGACAAGGCGGTAACCAAGACGTTAGCTGAAATGGGTCTGGAAGATTGTGCAGATAGCAGACTCGGGAATTGGCATTCAAGAGGCATTAGCAAAGGGGAGAAGAGAAGGCTCAGCATAAGCATTGAGATCTTAACTCAGCCTCATATACTTTTGCTTGATGAACCTACCAGTGGGCTGGACAGTGCAGCTGCTTTCTTTGTGATCTCATCTCTGAGAAGCATAGCTCATGATGATGGAAGAATAGTTATCTGCTCCATTCACCAGCTTAGTAGTGAAGTGTTCAACCTTTTTGATGATCTGGTCCTCCTTGCAGGAGGTGAAGCTGTGTATTTTGGGGAAAGAACCAAGGCAGTTGAGTTCTTTGCTGATGCAGGGTTGCCTTGCCCGACAAGGAAAAATCCTCCAGAACACTTCCTTCGTTGTGTTAACCCAGAGTTTGATAGTGTTCCGACCTTAGTACAGTCCAAAAATGTCAATGAAGCTCCATCATCAAGGAATTCTCTAAGGAATATGACAACGGAGGAGATTAAATGGGAACTTATAAAGAACTACAAGAATTCCATGCATTCAGCAAATGCAAGGAAAAGAATCAGCGAAATCAAACAAAGAAAAGAACCTTTAATTGAGAGGGCGTGTGATACCAGCAGGCCGAAGCAGCTATGCACGCTGACTCATAGATCATTCCTAAACATGACCAGAGACATCGGCTACTACTGGTTACGGATTTTGTTCTTTAACTTGGTATCAATGTGTGCTGGTTTTCTTTATTTTAACATAGGAACAAGCAATGACGCAATCTTGTCAAGAGGCAAGTGCGATGGATTCATCTATGGCTTTATGATCCTCCTTTGTATTGGTGGCTTACCCTTCTTCCTTGAGGAACTAAAGGTCTTCAAACGTGAAAGGTTTGGGAGGCATTATGGTGAGGCAGTCTATGTGCTGTCAAGTTTCATCTCATCATTCCCTTTTGTACTTGCCATTTCCCTCACTTCAGGAACAACACTTTACCACATGGTGAACTTTCATCCAGGATTCTCTCATTACTGCTATTTTTGCATAAACCTATTCTGCAGCATTTCTGTGACAGAAGGGTGCATGCTATTAGTTGCAGCACTAGTGTCCAACCTATTGTTGGCTATGGGAACTGCAGCTGGTGTAACTGTACTCATGATGATGCCATCAAATGTATTCAGGAGGGTGGCAGACATTCCAAAATTCTTCTGGCGCTATCCAATGTCTTACATCAGCTACACTGCATGGTCAATACAGGGTCAGTTCAAGAATGACCTGATTGGACTAGAATTTGAACCACTCATGCCAGGGGATACAAAGATAAAGGGTGAAGTGATACTTCATGATATATTTGGAATCAGAACTGATTATTCAAAATGGTGGGATTTAGGAGCCATGGTTTGCTTGCTAATATCTTATAGACTGCTCTTTTTCTTGGTTCTTAAGCACAAGGAGAGAGCTTCATCAGTGTTACCCACCAAAAGGACTATCCTAGACATTTTACTAAGAAGGCCCTCACTTGAGGACAAATGTATTGTTTCTTCCAAGAGACACCATTCTCTGTATCCTTTGTCATCTCAGGAGGGTCTTAGCTCTCCAATATCTTAG 2007 0.427 MELLGDAVDNNKREEVCLVWEGLTVVSTSPRKNLLSGLSGYAEPNRIMALIGPSGAGKSTLLDALAGRLPTNVSMTGNVLLNGTKRSTSCRDISYVTQEDYFLGTLTVRETLTYAAHLRLPSNMTRDDIDKAVTKTLAEMGLEDCADSRLGNWHSRGISKGEKRRLSISIEILTQPHILLLDEPTSGLDSAAAFFVISSLRSIAHDDGRIVICSIHQLSSEVFNLFDDLVLLAGGEAVYFGERTKAVEFFADAGLPCPTRKNPPEHFLRCVNPEFDSVPTLVQSKNVNEAPSSRNSLRNMTTEEIKWELIKNYKNSMHSANARKRISEIKQRKEPLIERACDTSRPKQLCTLTHRSFLNMTRDIGYYWLRILFFNLVSMCAGFLYFNIGTSNDAILSRGKCDGFIYGFMILLCIGGLPFFLEELKVFKRERFGRHYGEAVYVLSSFISSFPFVLAISLTSGTTLYHMVNFHPGFSHYCYFCINLFCSISVTEGCMLLVAALVSNLLLAMGTAAGVTVLMMMPSNVFRRVADIPKFFWRYPMSYISYTAWSIQGQFKNDLIGLEFEPLMPGDTKIKGEVILHDIFGIRTDYSKWWDLGAMVCLLISYRLLFFLVLKHKERASSVLPTKRTILDILLRRPSLEDKCIVSSKRHHSLYPLSSQEGLSSPIS* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2237 668 ProSitePatterns ABC transporters family signature. 158 172 IPR017871 GO:0005524
Dod01g2237 668 Pfam ABC-2 type transporter 348 553 IPR013525 GO:0016020|GO:0140359
Dod01g2237 668 Pfam ABC transporter 37 186 IPR003439 GO:0005524
Dod01g2237 668 Gene3D - 6 252 IPR027417 -
Dod01g2237 668 Pfam ABC-2 type transporter 216 274 IPR043926 GO:0140359
Dod01g2237 668 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 259 IPR003439 GO:0005524
Dod01g2237 668 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 17 623 - -
Dod01g2237 668 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 250 IPR027417 -
Dod01g2237 668 CDD ABCG_EPDR 18 241 - -
Dod01g2237 668 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 17 623 - -
Dod01g2237 668 SMART AAA_5 44 236 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2237 Dod-Chr1 59923836 59928880 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2237 10 202 Acyl Lipid Metabolism Gene Families AT1G54350 29.694 8.32e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2237 K05681 - aip:107646291 1064.68