Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2235 ATGGCGGGGCTGAAGGGCTTATTGAAGAAGGATTTAGGAGAGATGGGATTCAATGCCGGCGGTGGAGCCATCAACTGGTTCCCTGGACACATGGCAGCCGCCACGCGCGCCATCCGCAACCGCCTCAAGCTGTCGGACCTCGTGATCGAAGTCCGCGACGCGCGCATCCCCTTGTCGTCCGCCAACCCCGACCTCCAGCCTCACCTCTCCGGAAGTAAACGACGCGTCGTCGCCCTCAACAAGAAAGACCTCGCCAACCCCAACATCATGCACAAATGGGTGGATTATTTTGAGAGGTGCAAGCAGGATTGCATCCCGATAAATGCGCATAGCAAGAGCTCCGTTAAGAAGCTTCTGGAACTTGTGGAGTTGAAGCTGAAGGAAGTGATCTCGAGGGAGCCTACTCTGCTGGTTATGGTGGTTGGTGTTCCTAATGTTGGCAAGTCTGCTCTCATTAACTCCATTCATCAAATTGCCCACTCTCGCTTCTCTGTGCAGGAGAAAACAAAGCGAGCTGCTGTGGGTCCACTACCTGGTGTTACTCAAGACATTGCTGGATTCAAGATAGCAAACAAACCCAGCATATATGTCCTAGATACCCCTGGGGTGCTGGTTCCGAGTATCTCAGACATAGAGACAGGGTTAAAGCTGGCTCTTGCAGGGTCTGTTAAAGATTCAGTGGTGGGTGAGGAGCGTATTGCCCAGTACTTACTGGCAGTTTTGAATACCCGGGGGACTGCACTTCACTGGAGGCACCTTAATAACAGGAGAATAGATGGGATTGAATATGATGCTGTGGAAAAACCTGACTATAATCTGAAAAATCTAAAGTCAAAGAGAAGAGTTCTACCTAATAGATCTGACTTGGTCTATGTTGAGGACCTTGTAATGGAAGTTCAGCGTGCACTCTATTTGACACTAACAGAATTCAATGGCAACGTAGAAGATGAGAATGACTTAGAGGGCCTCATTGACCTGCAGTTTGGTGCACTGCAGAAGGCAATGAAAATCCCTCACAAGGCATCAGAAGCACGGTTGATGGTATCCAAGAAGCTTCTTACTTTATTCAGGGCTGGTAAACTTGGACCCTTCATTCTTGATGATGTCCCCAATGTCAAGCCTGTATCATAA 1131 0.4907 MAGLKGLLKKDLGEMGFNAGGGAINWFPGHMAAATRAIRNRLKLSDLVIEVRDARIPLSSANPDLQPHLSGSKRRVVALNKKDLANPNIMHKWVDYFERCKQDCIPINAHSKSSVKKLLELVELKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIAHSRFSVQEKTKRAAVGPLPGVTQDIAGFKIANKPSIYVLDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLAVLNTRGTALHWRHLNNRRIDGIEYDAVEKPDYNLKNLKSKRRVLPNRSDLVYVEDLVMEVQRALYLTLTEFNGNVEDENDLEGLIDLQFGALQKAMKIPHKASEARLMVSKKLLTLFRAGKLGPFILDDVPNVKPVS* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2235 376 Pfam 50S ribosome-binding GTPase 138 244 IPR006073 GO:0005525
Dod01g2235 376 Gene3D - 209 313 IPR023179 -
Dod01g2235 376 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 15 372 - -
Dod01g2235 376 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 35 206 IPR030378 GO:0005525
Dod01g2235 376 PANTHER SHORT INTEGUMENTS 2, MITOCHONDRIAL-LIKE 15 372 - -
Dod01g2235 376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 220 IPR027417 -
Dod01g2235 376 CDD YlqF 26 204 - -
Dod01g2235 376 Gene3D - 24 204 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2235 Dod-Chr1 59895988 59899603 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2235 K19828 - gmx:100785615 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2235 01 59895988 59899603 Dod01g2235 01 59895988 59899603 ECH