Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2225 ATGGTGGGAAGTATAATGGGGGTGGTTAGAAATACATATACAAATGGATCTGTTCAGAGTTGTAATGGGTTAGAGGAGAAGCTTGATGATCTAAGAGGCCTTGTTGGAAAGGCTGAAGGTGACCCTTTGAGGATTGTGAGTGTTGGAGCTGGAGCTTGGGGCAGTGTCTTTGCAGCTTTGTTGCAAGACACTTATGGCCAATTCAGGGACAAGATACAAATCAGGATATGGAGGAGGCCAGGTAGAGCAGTTGATAGAGCCACTGCTGAGCACCTCTTTGAGGTCATTAACTCAAGGGAGGATGTGTTGAGGAGGCTGATCAGGCGCTGTGCTTACCTCAAATATGTTGAGGCAAGGCTTGGTGATCGGACCCTCTTGGCTGATGAGATTCTCAAAGATGGTTTTTGCTTGAACATGATTGAGACACCACTTTGTCCTTTGAAGGTGGTGACTAACTTGCAGGAAGCTGTTTGGGATGCTGATATTGTTGTTAATGGCTTGCCTTCAACTGAGACACGGGAGATCTTTGAAGAGATTAGTAAGTATTGGAAGGAGAGGATCACAGTGCCTATAATTATCTCCTTGGCAAAGGGTATTGAGGCTGCATTGGAGCCTGTTCCACATATTATAACCCCAACAAGAATGATTAACCAAGCAACTGGAGTGCCAATGGAGAACATACTCTATCTTGGTGGTCCAAATATTGCCTCAGAAATCTACAACAAGGAGCATGCCAATGCTAGAATATGTGGTGCTGAGAAATGGAGGAAACCTCTCGCCAAGTTTCTGAGACAACCACATTTTATTGTCTGGGACAACAGTGATCTAGTCACCCATGAGGTCATGGGTGGCTTGAAAAATGTGTACGCAATTGGAGCTGGTATGGTAGCTGCCCTTACCAATGAGAGTGCTACAAGCAAATCTGTATACTTTGCACACTGTACTTCAGAGATGATATTTATCACTCACTTGTTGGCTGAAGAACCAGAAAAACTTGCAGGGCCATTACTGGCTGATACTTATGTGACTTTGTTAAAAGGACGTAATGCATGGTATGGCCAGATGTTAGCTAAGGGTCAACTAAGCCCTGACATGGGTGACAGCATTAGTGGCAAAGGAATGATTCAGGGTGTCTCTGCAGTGGAGGCATTCTTTGAACTTTTGAGCCAATCTAGCCTGAATGTGTTGCATCCTGAAGAAAACAAGCCTGTTGCTCCCGTGGAGCTCTGCCCTATCTTGAAGACACTGTACAAGATATTGATATCCAGGGAACAGTCAACACAAGCTATTCTAAAAGCTCTGAGGGACGAAAATCTGAATGATCCCCGTGAACGCATTGAGATTGCTCAAAGCCATGTTTTCTACAGGCCATCACTTCTTGGACAACCATGA 1392 0.4476 MVGSIMGVVRNTYTNGSVQSCNGLEEKLDDLRGLVGKAEGDPLRIVSVGAGAWGSVFAALLQDTYGQFRDKIQIRIWRRPGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLLADEILKDGFCLNMIETPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLAKGIEAALEPVPHIITPTRMINQATGVPMENILYLGGPNIASEIYNKEHANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLSPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSTQAILKALRDENLNDPRERIEIAQSHVFYRPSLLGQP* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2225 463 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 1 463 - -
Dod01g2225 463 Coils Coil 21 41 - -
Dod01g2225 463 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 47 64 IPR006168 GO:0004367|GO:0006072|GO:0009331
Dod01g2225 463 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 268 292 IPR006168 GO:0004367|GO:0006072|GO:0009331
Dod01g2225 463 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 147 248 IPR011128 GO:0016616|GO:0046168|GO:0051287
Dod01g2225 463 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 44 275 IPR036291 -
Dod01g2225 463 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 275 430 IPR008927 -
Dod01g2225 463 Gene3D - 275 435 IPR013328 GO:0016491
Dod01g2225 463 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 275 429 IPR006109 GO:0004367|GO:0005975
Dod01g2225 463 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 1 463 - -
Dod01g2225 463 Gene3D - 26 106 - -
Dod01g2225 463 Gene3D - 124 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2225 Dod-Chr1 59721585 59726355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2225 1 463 Acyl Lipid Metabolism Gene Families AT2G41540 87.069 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2225 K00006 - gmx:100810871 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2225 01 59721585 59726355 Dod01g2225 01 59721585 59726355 ECH