Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2221 ATGTCTCCGGCGGCGGCGGTGCACCTTCGATCTCCGATCCACTCCTCCTCCTCCTTCCAAACCGCCGATTCCGTCCCCGATTCCCCTCTCTATAATCACACGCCTTTCCCATGCGTCGGCGTCGGCGGTGGCGGTGGTGGCTCCGTCTCCCGCGGCAGGTCGCGGCCCAGGCTCGCCAAGCTAAGGAAGCAGTCTGCGTCTCAGTGCGCGAGGTCCAGGACCAGAACCGCCGCCTCCGGCTCCGATTCATTTCGCTCCGATCAGGTAGCCGGTAACATTGGCGCGTTAAACGGTTTTTCGTTAGGTTCTGGTGGAGTAGAGAGTGGTGCCGGAGCTTGTGACGGTGGTTCTTCTTCGAACTGTTGTCGCAGGCTTCGGAGCGAGGGTTTTGTGTTTGGTGCTAAAAAAGTTGGTTCTGATTCCACTAGGGATTTAGATTCTGAGCCGGGGGGGAGTGTTCCGTGTACAGAAGGTTCTGGAAGCTTCGGAGGGGAGGGTGCGACTGAGAGGGAGACGGAGGTTAGGAAGAGTGATCGTGTGGAATTTGTGTTTAGTGCTGGAAGGAGTGATGTCGAATGGAATTCTGGAAGGAAAACAGTTGCAGGGATGGGTTGTGGTGATGGAAGAAAGCCTGGATTGAATTCTGAAATTAAGGATGGAGGGTTTGATGTTAAGGAATTTGTTTTTCGAGCTGATCAGAATGGTTTTGTTGACAATTCAAATGCAGAAAAGGGGAAATCTAGTGAATGTGCCGACAATTCGGGGTTTGACGATGGTGGAGAGGGGAAATTTAGGGCTGGAGTTGAGTGTGGAAGGCAGGATAGTTTTGTTTTTGGTAACTGTAACAGTAAAGCATCGAGTTTTAGTGTGGAAAAGCAGAAGTCTCTTGACAGCATGGGAAATTTGGATCCTCAAATGGGTACTTTTAGTGCCAAGGCTGAAACAGATGGTAGTAGTAATAGTGATGATATGGGCAAGAGTGGAAATGGAAGTACTAATGGTGTTTCTCCTGCATTTAGTGCCATTCCTGCACATGAATTGACTGATGAGATGAAGAAACTGAACATCAATCATTCTGAGAGTGCTGATATCACTAGAGATTCAATGAATTTACATGTAAATAGTAGCACTGGTTCTCTGTTTGCAGGAAGTGAGAAGGTCTGTGGCTATTCTAGTGGTGATTCAGGAACTAGTGCTAGTAATGCTGCTTTTGAGAATATTAGTGAGCAATATTTCAAAGCATGCGAAACGAATGATCTTCAAAATAAAGCTGGCTGCGGTATTGCCTGTGATTCTGGAGGAATTCCTTGCCCTAAGCCATCCACTAGTGGGGAAGGCATCAATGATTTCAAGTGTGGCCAAATCCCAGAAACTTATGTACTTGGAGGTTCACAAGTGAACGGATCTACAGCACCATTTTCCTCCTCATCATTTGGTCTTGATTCCCATCCAGATAATTGTGCTTCTGCAGGCCATTCCTTGAATGCAGATCATGATAAGCGTAATAATTATTTTACAAGTATTCCAGAGGCATCGGAGGAGCCTTTTACGGACTTTAAACCCCCAACATGGGATCCTTCTTCTTTTAAAGACAACTTATTTCCTAAGTTAAATGGAAAATTCGAATCCACACAAAAGGTCAGATCTTCTAAGGAAAAAGGATCGAAACATACTAGAAGAAAGTTGAAGTCTCAATCCTTGAATAAGAAACAGACAAGGCTAGATCATTTGTCAAAGGAAAACAGTTCGCTTGAAACCCCTGATTCCTCTGGTTGCCACTCACCCATGGATTTTTCTCCCTATCAGGAAACAGCCGAAGATGATCAAGATGTAAAAGCTTCGGAGTTAAATGATCATCACTCAACAATGCCTGCTGATTCTAAAGAGGAACACTTGGCTGCTGATGGGAGAGGAGTGAATATGTGTACAAGTGATCAAAGATGTGGGAATCCTGATGATGACAGGTTATTCTCCTGTAATGGTAGTTCGTCTGCTGATGTTTTTCATTCTTCTGGTCCTGAAATAGTCTGGCCTAATTTGAAAACCGAGCAATTTAGCAGTAGTCCTGTTGATTCTGGTTTTGACTTTAGCTCAAACACTGAAGGGCTTAAAGCTGGTCCATTCTGTTTTGTTCACGGTCTGGGTGATTCAAAGGAGAAAGATTTTGCATTTTCTGCATCATCTACTGTAGCAGGTGCTTCATCATTGTTAAAGAGTAAACAGAAGAAAAAATTTAGGAGGAAAATGCGCCGTGATTCATTTGTTATGTCTCCGAATCTGAATGGAAAGTTTGAATCTTCTGTACGGTTTTCAAATTCTGATGTCATGTATAGTTCTCAGATCAATGATCAGTTCAAGGAAGGGGGTGTTGCATCCTCATCTGCATTTGGTGAAGCCTGTGAAAAGTGGAGACTCAGGGGTAACCAAGCTTATAAAGATGGGGATCTTTCTAAAGCTGAGGACTTCTACACCCTAGGGATAAATTCTGTCCCTTCAAGTGAAAAATCAGAATGCTGGGTTAAACCTCTTTCACTGTGTTATAGCAACCGTGCAGCAACACGCATGAATCTTGGAAGGATTCGAGAAGCTCTAGAGGATTGCATGATGGCTTCTGCCGTTGACCCCACCTTTCTGAAAGTACAGATGAGGATTGCTAACTGCCACCTTTTGTTAGGAGAAGTAGAAAATGCACAGCAGTGTTTTAGTAAGTGCTTAGAATCAGGTAATATTATTTGTCTGGATCGGAGAGTTGTAGTAGAAGCAGCTGAAGGTTTACAAAAGGCTCAGCAAGTGGTTGAGTGTTTAAACAATGCTGGTGAACTTTTAAACAAGAGGACTTCTGATGCAGCTGGTACTGCTTTAGAACTACTTACAAAGGCATTGTCAATGAGTTTATATTCAGAAAAATTGCTTCAAATGAAGGCAGAGGCTCTATTTTTGTTGCAAAAATATGATGCAGCAATTCAACTCTGTGAACAGAGTCAATATCTTGCAGAAAAGAATTTTGCCATGGCAAACAGTGCAAATAATTCCAATATTTCCATGCATGATTCTTTCTCATATGTAAAATTTTGGAGGTGGGCATTGATATCCAAGTGTTACTTTCATTTGGGACAGCTCGAGGCATCGCTTAATGTTCTTGAGAAGTTACAGCAAGTTGTTTCTGGCAATGACAAATGTGCGATTGATAACAATGAAGATTTGCTGTTGTTAGCTACTACAATACGAGAACTTCGAGACCACAAGAATGCAGGAAATGAAAATTTTAAATTGGGAAAGTATACAGAAGCAGTGGAGAATTACACTGCTGCTTTATCTAGCAATATCAAATCTCGTCCTTTTGCAGCTATATGTTTCTGCAACCGTGCTGCTGCTTATCTGGCGTTGGGCCAGATTGCTGATGCCATTGCAGACTGCAGCATGGCTATGGCACTTGATGGAAATTATGCAAAGGCAATTTCAAGAAGAGCCACCATACATGAGATGGTTCGGGACTATGAGCAAGCAGCTTGTGACCTGAGGAGACTTAGATCTGTTCTTGAAACTCAATCCAATCAAAAGGCCAAACAGTCTGACTCACCCAGTGGATCATATGGTGTGAAAGAATTGAGGCAAGCTCATCAACGTCTGCTTTCAGTGGAAGATCTGGCCAAAAAGGGAACCCCCTTAGACTTTTATCTCATTCTAGGAATCAAACTAGATGCTACTGCAACTGACATCAAGAAGGCATACCACAAGGCAGCTCTCAAACATCATCCAGACAAGGCTGGTCAGTTGTGGGCAAGAAGTGAAGTTGGAGATGAAGGCCGAGTCTGGAAGGAAATTTCACAGGAGGTGCAGAAGGATGCTGATAGGCTTTTTAAAATGATTGGAGAGGCATATTCTATGCTTTCAGACCCAGACAAGGTTATATGCATGACGTTTTGCTAG 3930 0.4354 MSPAAAVHLRSPIHSSSSFQTADSVPDSPLYNHTPFPCVGVGGGGGGSVSRGRSRPRLAKLRKQSASQCARSRTRTAASGSDSFRSDQVAGNIGALNGFSLGSGGVESGAGACDGGSSSNCCRRLRSEGFVFGAKKVGSDSTRDLDSEPGGSVPCTEGSGSFGGEGATERETEVRKSDRVEFVFSAGRSDVEWNSGRKTVAGMGCGDGRKPGLNSEIKDGGFDVKEFVFRADQNGFVDNSNAEKGKSSECADNSGFDDGGEGKFRAGVECGRQDSFVFGNCNSKASSFSVEKQKSLDSMGNLDPQMGTFSAKAETDGSSNSDDMGKSGNGSTNGVSPAFSAIPAHELTDEMKKLNINHSESADITRDSMNLHVNSSTGSLFAGSEKVCGYSSGDSGTSASNAAFENISEQYFKACETNDLQNKAGCGIACDSGGIPCPKPSTSGEGINDFKCGQIPETYVLGGSQVNGSTAPFSSSSFGLDSHPDNCASAGHSLNADHDKRNNYFTSIPEASEEPFTDFKPPTWDPSSFKDNLFPKLNGKFESTQKVRSSKEKGSKHTRRKLKSQSLNKKQTRLDHLSKENSSLETPDSSGCHSPMDFSPYQETAEDDQDVKASELNDHHSTMPADSKEEHLAADGRGVNMCTSDQRCGNPDDDRLFSCNGSSSADVFHSSGPEIVWPNLKTEQFSSSPVDSGFDFSSNTEGLKAGPFCFVHGLGDSKEKDFAFSASSTVAGASSLLKSKQKKKFRRKMRRDSFVMSPNLNGKFESSVRFSNSDVMYSSQINDQFKEGGVASSSAFGEACEKWRLRGNQAYKDGDLSKAEDFYTLGINSVPSSEKSECWVKPLSLCYSNRAATRMNLGRIREALEDCMMASAVDPTFLKVQMRIANCHLLLGEVENAQQCFSKCLESGNIICLDRRVVVEAAEGLQKAQQVVECLNNAGELLNKRTSDAAGTALELLTKALSMSLYSEKLLQMKAEALFLLQKYDAAIQLCEQSQYLAEKNFAMANSANNSNISMHDSFSYVKFWRWALISKCYFHLGQLEASLNVLEKLQQVVSGNDKCAIDNNEDLLLLATTIRELRDHKNAGNENFKLGKYTEAVENYTAALSSNIKSRPFAAICFCNRAAAYLALGQIADAIADCSMAMALDGNYAKAISRRATIHEMVRDYEQAACDLRRLRSVLETQSNQKAKQSDSPSGSYGVKELRQAHQRLLSVEDLAKKGTPLDFYLILGIKLDATATDIKKAYHKAALKHHPDKAGQLWARSEVGDEGRVWKEISQEVQKDADRLFKMIGEAYSMLSDPDKVICMTFC* 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2221 1309 Pfam Tetratricopeptide repeat 879 906 IPR019734 GO:0005515
Dod01g2221 1309 MobiDBLite consensus disorder prediction 535 633 - -
Dod01g2221 1309 MobiDBLite consensus disorder prediction 42 87 - -
Dod01g2221 1309 MobiDBLite consensus disorder prediction 65 87 - -
Dod01g2221 1309 ProSiteProfiles dnaJ domain profile. 1224 1302 IPR001623 -
Dod01g2221 1309 SUPERFAMILY TPR-like 1080 1177 IPR011990 GO:0005515
Dod01g2221 1309 MobiDBLite consensus disorder prediction 1 26 - -
Dod01g2221 1309 CDD DnaJ 1224 1299 IPR001623 -
Dod01g2221 1309 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3 1302 - -
Dod01g2221 1309 MobiDBLite consensus disorder prediction 552 567 - -
Dod01g2221 1309 PRINTS DnaJ domain signature 1226 1244 IPR001623 -
Dod01g2221 1309 PRINTS DnaJ domain signature 1282 1302 IPR001623 -
Dod01g2221 1309 PRINTS DnaJ domain signature 1244 1259 IPR001623 -
Dod01g2221 1309 Coils Coil 925 945 - -
Dod01g2221 1309 SMART dnaj_3 1223 1302 IPR001623 -
Dod01g2221 1309 MobiDBLite consensus disorder prediction 311 338 - -
Dod01g2221 1309 MobiDBLite consensus disorder prediction 568 582 - -
Dod01g2221 1309 Pfam DnaJ domain 1224 1302 IPR001623 -
Dod01g2221 1309 Gene3D Tetratricopeptide repeat domain 914 1069 IPR011990 GO:0005515
Dod01g2221 1309 MobiDBLite consensus disorder prediction 299 338 - -
Dod01g2221 1309 SUPERFAMILY TPR-like 801 993 IPR011990 GO:0005515
Dod01g2221 1309 SUPERFAMILY Chaperone J-domain 1205 1302 IPR036869 -
Dod01g2221 1309 SMART tpr_5 968 1001 IPR019734 GO:0005515
Dod01g2221 1309 SMART tpr_5 1078 1111 IPR019734 GO:0005515
Dod01g2221 1309 SMART tpr_5 1150 1183 IPR019734 GO:0005515
Dod01g2221 1309 SMART tpr_5 878 911 IPR019734 GO:0005515
Dod01g2221 1309 SMART tpr_5 844 877 IPR019734 GO:0005515
Dod01g2221 1309 SMART tpr_5 800 833 IPR019734 GO:0005515
Dod01g2221 1309 SMART tpr_5 1024 1057 IPR019734 GO:0005515
Dod01g2221 1309 SMART tpr_5 1116 1149 IPR019734 GO:0005515
Dod01g2221 1309 Gene3D Tetratricopeptide repeat domain 798 913 IPR011990 GO:0005515
Dod01g2221 1309 Gene3D Tetratricopeptide repeat domain 1077 1195 IPR011990 GO:0005515
Dod01g2221 1309 MobiDBLite consensus disorder prediction 605 633 - -
Dod01g2221 1309 MobiDBLite consensus disorder prediction 11 26 - -
Dod01g2221 1309 MobiDBLite consensus disorder prediction 138 174 - -
Dod01g2221 1309 MobiDBLite consensus disorder prediction 583 597 - -
Dod01g2221 1309 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3 1302 - -
Dod01g2221 1309 Gene3D DnaJ domain 1212 1303 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2221 Dod-Chr1 59648750 59659267 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2221 K09527 - gmx:100809278 1370.91