Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2197 ATGGACCATATCAGTAATGAGGCTAGTGTTGACCGTTTTCCAATTGGCCCTTCAGGGATTCTTGGTCGGACAATTGCTTTCAAGGTTCTTTTCTGCAAGTCTATGTCACATTTGAGGTACCACATAGTTCATGTCTTGTTGGATCTCATTTATAGGTTTAGGGGATTCTTGGCACCTGTTGTATCATGGTTTCATCCAAGGAACCCGCAGGGGATATTAGCGATGGTGACAATAGTTGCTTTCTTGTTGAAACGATATACAAATGTGAAGGCAAGGGCTGAAATGGCGTATAAGAGGAAGTTTTGGAGGAATATGATGAGAGCTGCGTTGGCTTATGAGGAGTGGGCTCATGCAGCCAAGATGCTCGATAAATTGACTCCAAAGATGAATGAATCAGACCTTTATGATGTAGAATTGGTGAGGAACAAGCTTCAAGAGCTACGCCACCGTCGGCAAGAAGGATCTCTTAGAGATATAATATTTTGTATGCGTGCTGATCTTGTTAGAAATCTAGGTAATATGTGTAACCCTGAGCTCCACAAGGGTAGGCTTCAGGTGCCCAGATTAATCAAGGAGTACATTGATGAGGTATCGACTCAATTGAGAATGGTCTGTGACTCCGATTCAGAGGAGCTCTCATTGGAGGAAAAGCTTGCTTTCATGCATGAAACTAGACATGCATTTGGGAGGACAGCTTTGTTGCTAAGTGGGGGTGCTTCTCTTGGAGCCTTTCACCTGGGTGTAGTTAAGACACTGGTAGAACATAAATTATTGCCTAGGATAATTGCTGGCTCTAGTGTTGGATCCATTATGTGTGCTGTTGTTGCCACTAGGTCTTGGCCTGAGCTTCAAAACTTTTTTGAGGATTCATGGCACTCGTTGCAATTTTTTGATCACATGGGTGGGATTTTTACGGTTGTCAAGAGGGTCACCAACTTTGGTGCTGTTCATGAGATCAGACAGTTGCAAATGATGTTGAGGCATCTAACAAGCAACCTTACATTTCAAGAGGCTTATGACATGACGGGTAGAATTCTTGGGATTACAGTTTGCTCCCCAAGAAAGCATGAACCACCAAGATGTCTTAACTACTTGACTTCACCCCATGTTGTTATATGGAGTGCAGTCACTGCTTCTTGTGCCTTTCCTGGCCTTTTTGAGGCTCAGGAATTGATGGCGAAGGATAGAAGTGGAGAAATTGTCCCTTTCCATCCTCCTTTTAATTTGGGTCCTGAGGAGGGATCCACTCCAGCACGCCGTTGGAGGGATGGTAGCTTGGAGATTGATTTACCTATGATTCAGTTGAAAGAGCTGTTCAATGTCAATCACTTTATAGTCAGTCAGGCCAACCCTCATATTGCACCATTATTGAGATTGAAAGAATTTGTGCGAAGTTATGGAGGCAATTTTGCTGCCAAGCTTGCTCATCTTGTGGAGATGGAGGTGAAACATAAGTGTAGGCAAGTCCTTGAACTTGGCTTTCCATTAGGTGGACTTGCCAAGCTCTTTGCTCAAGAGTGGGAAGGTGATATAACTGTTGTTATGCCTGCAACCCTTGCTCAGTACTCAAAACTTTTACAGAACCCTTCTTATGGGGAGCTTCAAAAGGCAGCCAACCAAGGGAGAAGATGCACCTGGGAGAAGCTTTCGGCCATAAAAGCAAATTGTGGAATTGAGCTTGCCCTTGATGAGTGTGTTGCAATTCTGAATCATATGAGAAGACTCAAGAGAAGTGCCGAGAGAGCTGCTTCTGCTTTGCATGGTTTGTCCAGTGCCGTAAATTTCAATCCATCAAGAAGAATTCCCTCATGGAATTGCATTGCTCGAGAGAATTCGACAGGATCCCTTGAAGACCTTACAGATGTTCCTTCCTCGTTGCATCAAGGTGTTAGTGGTTCCAATGGAGCCAATGTTAAAAACTGGAGGACCCACCGCGGCATACATGATTTAAGCGACAGTGATTCTGAAAATGTTGATTTGAGTTCCTGGACCAGATCTGGTGGGCCTTTGATGAGAACTACATCAGCAAATAAGTTCATCGACTCTCTCCAAAACTTAGATGTTGATTCGGAGCCAAATAGATGTCTGGGGGCTCATTCTAACCCTCATGATTTTCAGTATCATAGTCCTAGTCCTAGGCACACAACACCAGATTGGAGCTCTGAGAGCACGGAATCTGATCAGAAGGAAATTGGCAACAGGGTTGTTAATGGTTCTAGCTTAGTGGTAGCTGAAGGTGATCTTTTGCAGCCTGAAAGGATCCATAATGGGATTGTGTTTAATGTTGTCAAGAAAGAAGACCTAACACCTTCAAGTAGGAGTCATGATTCCGAAAATTACAACAATGAAGATGCTGAATGTGTCCAAATTGACTCTCTAGGAAAGGACATGGATGCTGCTAACTCAGATTCTGAAAGTGGAGATGATAAATCCACTTGCAGCTAG 2445 0.4368 MDHISNEASVDRFPIGPSGILGRTIAFKVLFCKSMSHLRYHIVHVLLDLIYRFRGFLAPVVSWFHPRNPQGILAMVTIVAFLLKRYTNVKARAEMAYKRKFWRNMMRAALAYEEWAHAAKMLDKLTPKMNESDLYDVELVRNKLQELRHRRQEGSLRDIIFCMRADLVRNLGNMCNPELHKGRLQVPRLIKEYIDEVSTQLRMVCDSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGAFHLGVVKTLVEHKLLPRIIAGSSVGSIMCAVVATRSWPELQNFFEDSWHSLQFFDHMGGIFTVVKRVTNFGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPFHPPFNLGPEEGSTPARRWRDGSLEIDLPMIQLKELFNVNHFIVSQANPHIAPLLRLKEFVRSYGGNFAAKLAHLVEMEVKHKCRQVLELGFPLGGLAKLFAQEWEGDITVVMPATLAQYSKLLQNPSYGELQKAANQGRRCTWEKLSAIKANCGIELALDECVAILNHMRRLKRSAERAASALHGLSSAVNFNPSRRIPSWNCIARENSTGSLEDLTDVPSSLHQGVSGSNGANVKNWRTHRGIHDLSDSDSENVDLSSWTRSGGPLMRTTSANKFIDSLQNLDVDSEPNRCLGAHSNPHDFQYHSPSPRHTTPDWSSESTESDQKEIGNRVVNGSSLVVAEGDLLQPERIHNGIVFNVVKKEDLTPSSRSHDSENYNNEDAECVQIDSLGKDMDAANSDSESGDDKSTCS* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2197 814 MobiDBLite consensus disorder prediction 648 667 - -
Dod01g2197 814 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 711 - -
Dod01g2197 814 Pfam Patatin-like phospholipase 233 412 IPR002641 GO:0006629
Dod01g2197 814 CDD Pat_SDP1-like 163 570 - -
Dod01g2197 814 Gene3D Cytosolic phospholipase A2 catalytic domain 321 488 - -
Dod01g2197 814 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Dod01g2197 814 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 711 - -
Dod01g2197 814 Gene3D Cytosolic phospholipase A2 catalytic domain 230 320 - -
Dod01g2197 814 SUPERFAMILY FabD/lysophospholipase-like 229 575 IPR016035 -
Dod01g2197 814 Pfam Domain of unknown function (DUF3336) 95 226 IPR021771 GO:0004806|GO:0006629
Dod01g2197 814 MobiDBLite consensus disorder prediction 691 733 - -
Dod01g2197 814 MobiDBLite consensus disorder prediction 704 722 - -
Dod01g2197 814 MobiDBLite consensus disorder prediction 790 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2197 Dod-Chr1 59158514 59162156 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2197 4 801 Acyl Lipid Metabolism Gene Families AT5G04040 74.381 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2197 K14674 - gmx:100791261 1394.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2197 01 59158514 59162156 Dod01g2197 01 59158514 59162156 ECH
Dod01g2197 01 59158514 59162156 Dod07g1170 07 29691458 29691817 PCT