Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2191 ATGGCTTCAAGGACCAGGACCCTTATTGCGAGGGCCCTGTCCCTGTCCATGTCCATGTCCTCCAAATCCAATTGTGCTAGGCCACTCCTCTCTGCCCTTTGCAAATCCTCCCCATACTACTCCTCTGCTGCTGCTGTGGAAGAAGCAGAAACAGACACAGAATCAAGGAGCAGCAGCATGGTGGATGAGGGGCTAGGACTGAAGGATTATGCAGATTACAGGAGGTCACTCTATGGCCAGATCACTCACAAGGCACTCCTTGTTGATGCTGTTGGCACCCTTGTCCTCCCTTCTCAGCCCATGGCCCAGATATATAGGAAGATTGGGGAGAAGTATGGAGTGGAGTACTCAGAGGATGAGATATTGTACAGATATAGGAGAGCTTATGGTCAGCCTTGGGGTAAATCTCGTCTCAGATATGTTAATGATGGTAGGCCATTCTGGCAATACATAGTTAGTTATTCCACCGGCTGTTCAGATTCTCAATACTTTGAAGAACTTTATAACTACTATATGACAGACAAGGCATGGCATCTCTGTGATCCTGAAGCAGAAGAAGTGTTCAAAGCCCTTCGAAAATCTGGTGTCAAATTGGCCATTGTCTCAAATTTTGACACTCGACTAAGACCTCTCCTGCGGGCATTAAATTGTGATAACTGGTTTGATGCAGTAGCAGTATCAGCTGAGGTTGAAGCGGAGAAGCCAAATCCAACTATATTTCTTAAAGCGTGTGAACTGTTGGGTGTAAAACCTGAGGATGTTGTTCATGTTGGGGACGATCGAAGAAATGACATATGGGGTGCCAGAGATGCAGGCTGTGATGCCTGGCTTTGGGGAAGTGATGTTCACTCCTTTAAGGAGGTAGCTCAGAGGATTGGAGTTGAGGTCTGA 891 0.4691 MASRTRTLIARALSLSMSMSSKSNCARPLLSALCKSSPYYSSAAAVEEAETDTESRSSSMVDEGLGLKDYADYRRSLYGQITHKALLVDAVGTLVLPSQPMAQIYRKIGEKYGVEYSEDEILYRYRRAYGQPWGKSRLRYVNDGRPFWQYIVSYSTGCSDSQYFEELYNYYMTDKAWHLCDPEAEEVFKALRKSGVKLAIVSNFDTRLRPLLRALNCDNWFDAVAVSAEVEAEKPNPTIFLKACELLGVKPEDVVHVGDDRRNDIWGARDAGCDAWLWGSDVHSFKEVAQRIGVEV* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2191 296 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 182 272 IPR006439 -
Dod01g2191 296 Pfam Haloacid dehalogenase-like hydrolase 92 275 IPR041492 -
Dod01g2191 296 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 84 278 - -
Dod01g2191 296 Gene3D - 99 172 IPR044924 -
Dod01g2191 296 SFLD Haloacid Dehalogenase 84 278 - -
Dod01g2191 296 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 31 296 - -
Dod01g2191 296 PANTHER - 31 296 - -
Dod01g2191 296 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 84 277 IPR011949 -
Dod01g2191 296 SUPERFAMILY HAD-like 84 287 IPR036412 -
Dod01g2191 296 CDD HAD_dREG-2_like 184 294 - -
Dod01g2191 296 Gene3D - 88 280 IPR023214 -
Dod01g2191 296 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 83 94 IPR006439 -
Dod01g2191 296 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 191 204 IPR006439 -
Dod01g2191 296 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 221 237 IPR006439 -
Dod01g2191 296 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 239 259 IPR006439 -
Dod01g2191 296 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 173 274 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2191 Dod-Chr1 59025803 59031201 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2191 - - adu:107492671 455.292