Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2185 ATGAGAGTTGGTCTTGCGGGTTCAGTAATGCCCTCACCCCAACAGAGGACGAGCGCAGACGACAGCAACAACGACAACAACATAGTACTGATAAGTAGTAGTAGTAGTGGTAGTAGTATAGTACTGCAACTCCGAATCGGACATAGGCTTCAATTTCAATCGAACATGTGTTCTTCTGCCATCTCTCTCAGACCCTCCCTTCATTCCCTCCTCTTTCAGAACCACTCTCAGAGCACAACTGCTGCAAATTCGTGGGAGGGCTTGGGGTTCAACAAGTCAGCAAATTTAGGCACAAACAGGCTGTTGTGTGCGAAGGGTTTCAAGCTGAATTGCTTGGTTGATAATAAAGTGATGGATGGGGCCATATCATCGTCAGCATCATCATCTTTGGTGAACGATGCAACAGTGGATTGCTTCGATGAAGATGGAATTGGGGAGCCTAGTATCTCAACAATGGTGATGAACTTCGATAATAAGTTTGATCCTTATGGAGCAATCAGTACCCCGCTTTATCAAACTGCTACTTTTAAGCAGCCTTCTGCAATTGAAAATGGTCCCTATGATTATACCAGGAGTGGAAATCCTACTCGAGATGCTTTGGAAAGTTTATTGGCGAAGCTTGATAAGGCAGATAGAGCCCTATGCTTCACCAGTGGAATGGCTGCTTTGAGCGCTGTTACTCATCTTGTTCAAACTGGTGATGAAATTGTTGCTGGAGATGATATATATGGTGGATCAGACAGGTTGCTGTCCCAAGTAACTCCAAAGACTGGAGTTGTGGTCAAACGAATAAATACATGTGACCTTAATGAGGTTGCATCTGCTGTTGGACCCAGGACTAAGCTTGTGTGGCTTGAGAGCCCAACCAATCCTCGGATACAAATTTCTGATATTCGAAAAATAGCAGAGATTGCCCATGCACATGGTGCTCTTGTAATGGTGGATAATAGTATAATGTCACCTGTGTTGTCCCGGCCACTGGAACTTGGAGCAGATATTGTCATGCACTCAGCTACCAAATTTATTGCTGGACATAGTGATATTATGGCTGGTGTGCTTGCAGTGAAAGGTGAAAGGTTGGGAAAAGACTTGTATTTCTTACAAAATGCAGAGGGTTCAGGCTTAGCTCCATTTGACTGTTGGCTCTGTTTGCGAGGAATCAAGACGATGGCACTGCGAGTTGAGAAACAACAGGATAATGCACAGAAGATTGCTGAGTTCCTTGCTTCCCATCCTCGAGTGAAGAAAGTAAACTATGCTGGTCTGCCTGGTCATCCTGGACGTGATCTACACTACTCGCAGGCAAAAGGTGCAGGAGCTGTGCTTAGCTTTTTAACAGGTTCACTGGCACTCTCACAGCATATTGTTGAAACTACCGAGTACTTCAGCATAACTGTTAGTTTTGGGAGTGTAAAGTCCCTCATCAGCATGCCATGCTTTATGTCCCATGCAAGTATACCAGCTGCAGTACGTGAGGCCAGAGGCTTAACTGAAGATCTTGTGCGTATATCTGTGGGAATTGAGGATGTGAATGATCTCATTTCTGATCTAGACCATGCACTTAGAACTGGCCCCATGTAG 1581 0.4491 MRVGLAGSVMPSPQQRTSADDSNNDNNIVLISSSSSGSSIVLQLRIGHRLQFQSNMCSSAISLRPSLHSLLFQNHSQSTTAANSWEGLGFNKSANLGTNRLLCAKGFKLNCLVDNKVMDGAISSSASSSLVNDATVDCFDEDGIGEPSISTMVMNFDNKFDPYGAISTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALSAVTHLVQTGDEIVAGDDIYGGSDRLLSQVTPKTGVVVKRINTCDLNEVASAVGPRTKLVWLESPTNPRIQISDIRKIAEIAHAHGALVMVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDIMAGVLAVKGERLGKDLYFLQNAEGSGLAPFDCWLCLRGIKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPGHPGRDLHYSQAKGAGAVLSFLTGSLALSQHIVETTEYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLVRISVGIEDVNDLISDLDHALRTGPM* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2185 526 MobiDBLite consensus disorder prediction 10 25 - -
Dod01g2185 526 MobiDBLite consensus disorder prediction 1 25 - -
Dod01g2185 526 Gene3D Aspartate Aminotransferase, domain 1 391 524 IPR015422 GO:0003824
Dod01g2185 526 TIGRFAM cysta_beta_ly_E: cystathionine beta-lyase 150 523 IPR006238 GO:0004121|GO:0071266
Dod01g2185 526 PANTHER BNAC04G24570D PROTEIN 97 526 - -
Dod01g2185 526 Pfam Cys/Met metabolism PLP-dependent enzyme 151 521 IPR000277 GO:0019346|GO:0030170
Dod01g2185 526 CDD CGS_like 164 522 IPR000277 GO:0019346|GO:0030170
Dod01g2185 526 SUPERFAMILY PLP-dependent transferases 156 522 IPR015424 -
Dod01g2185 526 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 97 526 IPR000277 GO:0019346|GO:0030170
Dod01g2185 526 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 332 346 IPR000277 GO:0019346|GO:0030170
Dod01g2185 526 Gene3D - 148 390 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2185 Dod-Chr1 58896766 58903755 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2185 K01760 - gmx:100812354 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2185 01 58896766 58903755 Dod01g2185 01 58896766 58903755 ECH