Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2182 ATGGATGATGTAGCGGGTTTGCCCGAGTTCGAGAGAGAGGGGGGTGAGGAGGATGACAAGGAGCAGCTGAGTGAGTGCTTGATCGGCTACTTCGACGATGGCAGCACCGAGAGCCACAGGTACTACCTTGCCCGCAGGACCACCCTAGAGATGCTCAAGGACAGAGGCTTCTCCATCCCTCCTTCTGAGATCGACCTCTCTCTCTCTGAATTCAGAGCCATTCACGGCCAGACACCCGACGCTGACCGCCTCCGCTTCTCCGCCACTCACCTCTCCGACCCTTCTAAGAGGATTTTAGTCATTTTCTGTGGGCCGGAGATTGTTAAGGTTAATGTGATCCGGAGCGTTGCGGCGCAGATTGTTAACAGAGAAACTTTAACTGGGCTGATATTGATAGTGCAGAATCAAATTACTAGCCAGGCCTTGAAAGCAGTGAATCTTTTTCAGTTCAAGGTTGAAATATTTCAGATCACAGACTTGCTTGTTAATATTACAAAGCATGTACTGAAGCCAAAGCATGAAGTGCTGACTGATAGACAGAAAAAGAATCTCCTAAAGAAGTACAATTTAGAAGAAAAGCAGCTTCCCCGCATTCTACAAACAGATGCAATTGCACGATACTATGGACTGGAGAGGGGGCAGGTAGTTAAGGTTATCTATAGTGGTGAAATCACTCAGATGCATGTCACCTATAGATGCGTTTGGTGA 708 0.4774 MDDVAGLPEFEREGGEEDDKEQLSECLIGYFDDGSTESHRYYLARRTTLEMLKDRGFSIPPSEIDLSLSEFRAIHGQTPDADRLRFSATHLSDPSKRILVIFCGPEIVKVNVIRSVAAQIVNRETLTGLILIVQNQITSQALKAVNLFQFKVEIFQITDLLVNITKHVLKPKHEVLTDRQKKNLLKKYNLEEKQLPRILQTDAIARYYGLERGQVVKVIYSGEITQMHVTYRCVW* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2182 235 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 16 235 IPR014381 -
Dod01g2182 235 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 36 163 IPR036710 GO:0003677|GO:0003899|GO:0006351
Dod01g2182 235 Pfam RNA polymerase Rpb5, N-terminal domain 36 119 IPR005571 GO:0003677|GO:0003899|GO:0006351
Dod01g2182 235 MobiDBLite consensus disorder prediction 1 20 - -
Dod01g2182 235 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A 16 235 - -
Dod01g2182 235 PIRSF RPB5 30 235 IPR014381 -
Dod01g2182 235 SUPERFAMILY RPB5-like RNA polymerase subunit 160 235 IPR035913 -
Dod01g2182 235 Gene3D - 160 235 IPR035913 -
Dod01g2182 235 Pfam RNA polymerase Rpb5, C-terminal domain 162 234 IPR000783 GO:0003677|GO:0003899|GO:0006351
Dod01g2182 235 Gene3D - 32 159 IPR036710 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2182 Dod-Chr1 58874697 58877026 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2182 K03013 - gmx:100306033 363.614