Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2181 ATGGACGCTAAGATTGGAAGCTTCTTCGAATCCATCGGAAACTTCTTCACCGGCGACCAAATCCCTTGGTGCGACCGTAACGTCATCGCTGGCTGCGAGAGAGAAGTTGCGGAGGCTCAGGCTGCTACTGGCGAAGACGCTGAGGGGCGGAGGAATGACAGCATAATGAGGTTGTCCTGGGCACTTGTTCATTCAAGGCAGAAGGAAGATGTTCGGCGCGGGATAGCCATGCTTGAAGCTGCTCTGGCCAATGAGCAAAGTCCTTTGCGTCAAAGAGAGAAGCTTTATCTTCTGGCTGTTGGATATTACAAGAGTAACGAATATGGTAGGAGTCGTCAACTTGTGGAGCAATGCTTGCAGATCGCACCTGATTGGAGGCAGCCACTGACCCTCAAGAAAATAGTTGAAGATCGAATTGCTAAAGATGGTGCTATAGGAATTGGCATCACCGCAACCGCTGTGGGACTTATAGTTGGTGGCATTGCTGCAGCATTAGGCCCGGAAGAATTGAGCGCGTTTGGCCTCTTGTTTTATTTTATTTTCTTTTCTTCTGGAAACTTGTTAAAGTCAGTTGGAAATAAACCTGTACTGACAAATACAGCTTTTAACATTTTAATTTGTTAA 624 0.4679 MDAKIGSFFESIGNFFTGDQIPWCDRNVIAGCEREVAEAQAATGEDAEGRRNDSIMRLSWALVHSRQKEDVRRGIAMLEAALANEQSPLRQREKLYLLAVGYYKSNEYGRSRQLVEQCLQIAPDWRQPLTLKKIVEDRIAKDGAIGIGITATAVGLIVGGIAAALGPEELSAFGLLFYFIFFSSGNLLKSVGNKPVLTNTAFNILIC* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2181 207 Pfam Fis1 N-terminal tetratricopeptide repeat 54 84 IPR028058 -
Dod01g2181 207 Gene3D Tetratricopeptide repeat domain 24 171 IPR011990 GO:0005515
Dod01g2181 207 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 1 165 IPR016543 GO:0000266
Dod01g2181 207 SUPERFAMILY TPR-like 13 164 IPR011990 GO:0005515
Dod01g2181 207 PANTHER MITOCHONDRIAL FISSION 1 PROTEIN B 1 165 - -
Dod01g2181 207 CDD Fis1 22 143 IPR033745 -
Dod01g2181 207 Pfam Fis1 C-terminal tetratricopeptide repeat 92 143 IPR028061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2181 Dod-Chr1 58870692 58873714 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2181 K17969 - gmx:100785425 259.225