Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2177 ATGACAACTATGGATACTTTGCTCAAAACACCTAACAAGCTTGAATTTTTGCACCCTTTACACGGTTATTCAGAAAAGTTGGGCCCCTCTAAGTTGCAGAACCATGAGCTTAGGTTTGGTTCCAAGAAGCCACTGGTGAAGTGGGGTAAGTGTGGTGGTGGTTTGAGGGCTAGGAGCAGTTCCCTTCTGGAGCTTGTTCCTGAAATCAAGAAAGAGAACCTTGATTTTGAGCTTCCTTTGTATGATTCCTCAAAGGGTGCTTTGGTGGACCTTGCTGTTGTGGGAGGAGGACCTGCAGGGCTTGCAGTTGCTCAGCAGGTTTCTGAGGCAGGTCTCTCGGTCTGTGCTATTGATCCAAACCCCAGATTGATATGGCCCAACAATTATGGTGTTTGGGTGGATGAGTTTGAAGCCATGGATTTACTTGATTGCCTTGATACCACTTGGTCTGGTGCTGTTGTCTTCATTGATGACAAAAACAAGAAGGATCTCGATAGACCTTATGGTAGGGTCAATAGGAAGCTGTTGAAATCAAAGATGATGCAAAAATGCATATCAAATGGTGTCAAGTTTCACCAAGCAAAGGTTACCAAGGTTATTCATGAGGATTCGAGATCTTTGTTGATTTGTAATGATGGCATCACTGTTCCGGCTACAGTGGTTCTTGATGCAACCGGCTTTTCAAGATGCCTTGTTCAGTATGATAAACCATATAATCCAGGTTACCAAGTTGCTTATGGGATTTTGGCTGAGGTTGATGAACACCCATTTGATGTAGATAAAATGCTTTTTATGGACTGGAGAGATTCACATCTGAGTGGTAACATGGAGTTGAAGGAGAGAAATAGCAGAATTCCTACCTTTCTATATGCCATGCCCTTTTCATCTACTAGGATATTTCTTGAAGAAACTTCTCTTGTTGCTCGGCCTGGATTGCGTATGGATGATATACAGGAGAGAATGGTTGCCAGGTTGAAACACTTGGGAATTAGAGTGAAGAGCATTGAAGAAGATGAGCACTGTGTCATTCCAATGGGAGGCCCCCTCCCGGTTCTCCCGCAAAGAGTTGTTGGAATCGGTGGTACTGCTGGGATGGTGCATCCTTCGACTGGGTATATGGTAGCAAGGACTCTTGCTGCAGCTCCCATTGTTGCTAATTCAATTGTACAGTTCCTTGGTGCTGATAGAGGTCATTCAGGAGCTGAAATATCTGCTCAAGTTTGGAAAGATTTGTGGCCCATCCAGAGGAGGCGACAAAGGGAGTTCTTCTGCTTTGGTATGGACATCTTACTCAAGCTTGATTTACCAGGAACAAGGAGATTTTTTGATGCATTTTTTGATCTGGAACCTCATTATTGGCATGGATTCTTATCATCAAGACTGTTTCTTCCTGAGCTCGTATTTTTTGGTCTCTCTCTATTTTCCTATGCTTCTAATACGTCTAGATTAGAGATTATGGCAAAGGGAACTCTTCCTTTGGTAAACATGATCAACAACTTGATAAAAGATACAGAATAA 1518 0.4295 MTTMDTLLKTPNKLEFLHPLHGYSEKLGPSKLQNHELRFGSKKPLVKWGKCGGGLRARSSSLLELVPEIKKENLDFELPLYDSSKGALVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFIDDKNKKDLDRPYGRVNRKLLKSKMMQKCISNGVKFHQAKVTKVIHEDSRSLLICNDGITVPATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPFDVDKMLFMDWRDSHLSGNMELKERNSRIPTFLYAMPFSSTRIFLEETSLVARPGLRMDDIQERMVARLKHLGIRVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIVQFLGADRGHSGAEISAQVWKDLWPIQRRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSRLFLPELVFFGLSLFSYASNTSRLEIMAKGTLPLVNMINNLIKDTE* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2177 505 PANTHER UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL 9 505 - -
Dod01g2177 505 Pfam Lycopene cyclase protein 90 482 - -
Dod01g2177 505 PANTHER LYCOPENE BETA CYCLASE, CHLOROPLASTIC 9 505 - -
Dod01g2177 505 SUPERFAMILY FAD/NAD(P)-binding domain 89 472 IPR036188 -
Dod01g2177 505 Gene3D - 87 430 IPR036188 -
Dod01g2177 505 TIGRFAM carotene-cycl: lycopene cyclase family protein 90 485 IPR010108 GO:0016117|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2177 Dod-Chr1 58825602 58827566 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2177 K06443 - gmx:100810895 919.842