Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2176 ATGGGTGGCCCATCGGAGGATTTCTCGGTGGTGGTTCTGGCGTCCGACCTCGCCGTCGACGCCCGGCCCTTTCTGTCCCACCGCGACTCCGAAATCGAAGAACAAGAACAAGAACAGGACAGCTGGCACGACTGCTCCCAGCACCTCTCCCCCGACGAAGACTTCTCCGATCTCGAGCTCCTTCACTTCATCCGCCTCCAGGGCTCCGACAAGAACGGCAACCGGATCCTCCGTGTCGTCGGAAAGTACTTTCCTGCTACGGTTGTGAGTGCTGAGCGGCTGAAGAGGTATGTTTTTCACAAAATTTGCAGTGAGTTGCCGGAGGGGCCATTCTGCATTGTTTACATGCATACCACTGTTCAAAAGGAGGAGAATTCCCCTGGCCTAACCATCTTGAGGTGGATTTATGAAGAACTTCCTGCTGATTTTAAGGATAGGCTTCAAACTGTGTATTTTGTCCACCCTGGGCTTCGTTCCAGGCTAGTCATTGCCACTCTTGGCCGGTTTTTCTTGAGCAGAGGATTATACTGGAAGATCAAGTATGTAAGCCGCCTTCAATATCTTTGGGATGATATTGTGAAAGGAGAGATTGAGATCCCAGAATTTGTGCAAAGTCATGATGGTGTTCTGGAGGATAGACCACTAACGGATTATGGCATTGAGCCTGACCCTTTTCACTTGAGTGGGATTCCTTCAACCACTTTCTCATTTGGGAAGTACGAGGAAAGATGGGCCGGAAGGGACTATGTGTCTTAG 756 0.5053 MGGPSEDFSVVVLASDLAVDARPFLSHRDSEIEEQEQEQDSWHDCSQHLSPDEDFSDLELLHFIRLQGSDKNGNRILRVVGKYFPATVVSAERLKRYVFHKICSELPEGPFCIVYMHTTVQKEENSPGLTILRWIYEELPADFKDRLQTVYFVHPGLRSRLVIATLGRFFLSRGLYWKIKYVSRLQYLWDDIVKGEIEIPEFVQSHDGVLEDRPLTDYGIEPDPFHLSGIPSTTFSFGKYEERWAGRDYVS* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2176 251 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 5 250 - -
Dod01g2176 251 Pfam Divergent CRAL/TRIO domain 73 207 IPR001251 -
Dod01g2176 251 SMART sec14_4 57 206 IPR001251 -
Dod01g2176 251 CDD SEC14 58 202 IPR001251 -
Dod01g2176 251 PANTHER OS01G0948300 PROTEIN 5 250 - -
Dod01g2176 251 Gene3D - 52 196 IPR036865 -
Dod01g2176 251 SUPERFAMILY CRAL/TRIO domain 64 192 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2176 Dod-Chr1 58817600 58820401 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2176 - - gmx:100810365 445.277