Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2174 ATGTCAGCTTCAATTATAGCAGACACTGCTCAGTGCTTCAGCACTCATCAGTTTGCCTGTTTAATAGGATATGGTGCAAGTGCTGTGTGTCCGTACTTGGCACTGGAGACATGCCGGCAGTGGCGTTTGAGTAATAAAACTGTAAATCTGATGAGGAATGGAAAGATGCCTACCGTCTCAATTGAACAGGCGCAGAAGAATTATTGCAAGGCTGTAAAAGCAGGTCTTCTTAAAATTCTTTCCAAAATGGGGATCTCATTGCTTTCAAGTTACTGCGGTGCACAGATTTTCGAAGTCTATGGACTAGGGAAGGAAGTTGTCGATCTTGCATTCAGAGGAAGTGTGTCGAAAATTGGCGGATTAACTTTTGATGAGCTAGCAAGAGAGACTTTGTCTTTTTGGGTGAAGGCGTTCTCTGAAGATACGGCTAAAAGATTAGAAAATTTTGGATTTATACAGTTCAGACCAGGAGGGGAATATCATGCAAACAATCCAGAGATGTCAAAGTTGCTCCACAAAGCTGTTCGTCAAAAAAGTCAAAGTGCCTTTTCTATTTATCAGCAGTATTTGGCTAATCGACCTGTGAATGTTCTTCGTGATCTTCTTGAGTTCAAAAGTAATCGTGCTCCAATACCTGTAGGGAAGGTTGAACCTGCTTCATCTATTGTGCAACGGTTTTGCACTGGTGGTATGTCACTTGGAGCTATTTCAAGAGAAACTCATGAAGCAATTGCAATTGCAATGAACAGATTAGGTGGAAAATCAAATTCAGGGGAAGGTGGTGAGGATCCTATTCGCTGGAAACCACTTACAGATGTCGTTGATGGTTACTCTCCAACTCTTCCGCACCTTAAAGGTCTTCAGAATGGGGATACTGCTACCAGTGCTATCAAGCAGGTTGCTTCAGGAAGGTTTGGTGTTACCCCAACATTCTTGGCAAATGCTGATCAATTAGAAATTAAAATTGCTCAAGGTGCAAAGCCTGGTGAAGGTGGACAACTGCCTGGGAAAAAAGTTAGCATGTATATTGCTAGGTTGAGAAACTCTAAACCAGGGGTTCCTCTTATCTCCCCACCTCCTCATCACGACATTTATTCTATTGAGGATCTTGCTCAATTGATCTTTGATCTTCATCAGGTGAACCCTAAGGCTAAGGTTTCGGTGAAACTGGTGGCTGAAGCTGGAATTGGCACTGTTGCATCTGGGGTTGCTAAGGGCAATGCGGACATTATCCAGATTTCAGGGCATGATGGTGGAACCGGAGCAAGCCCTGTAAGTTCCATCAAGCATGCAGGAGGTCCTTGGGAACTTGGGCTTACAGAATCTCACCAGACGCTCATTGAAAATGGACTTAGAGAAAGGGTAATTCTCAGAGTTGATGGTGGATTCAGAAGTGGAGTTGATGTCATGATGGCAGCTATAATGGGTGCTGATGAATACGGGTTTGGTTCAGTGGCAATGATTGCTACTGGATGTGTTATGGCCCGCATTTGCCACACCAATAATTGCCCAGTTGGCGTTGCCAGTCAGGTACGAGGCATATTGGCACAGCTGGGGTATGAGAAGTTAGATGATGTAATTGGCCTGACAGACTTGTTGCAACCAAGAGACATATCTCTAGTGAAAACTCAGCATCTGGACCTAAGTTATATCCTCTCTAGTGTTGGGTTGCCTAAATGGAGCAGTACAGAAATCAGGAATCAGGAGGCACATACTAATGGCCCTGTTCTGGATGATATTTTACTAGCTGACCCGGAGATTGCAGATGCCATTGAAAATGAAAAAATGGTCAGCAAGACCATAAAAATATACAACATTGATCGTGCTGTCTGTGGACGAATAGCTGGTGTCATTGCCAAGAAGTATGGTGACACTGGTTTTGCTGGACAGTTGAATATAACATTTACAGGAAGTGCTGGGCAGTCATTTGGGTGCTTTTTGACACCTGGAATGAACATTCACCTTGTAGGAGAGGCTAATGATTATGTGGGGAAGGGCATTGCTGGAGGGGAGTTGGTTGTCAGTCCTGTTGAGAAGACGGGGTTTCAACCTGAAGATGCAGCTATTGTGGGGAACACTTGCTTGTATGGGGCCACAGGTGGACAGGTCTTTGTTAGAGGGAAGGCTGGGGAGAGATTTGCTGTGAGAAACTCACTTGCTGAAGCTGTGGTTGAAGGTACAGGAGATCATTGTTGTGAGTATATGACTGGTGGCTGCGTTGTTGTCCTGGGAAAAGTGGGTAGAAATGTAGCTGCTGGAATGACCGGAGGGTTGGCTTACATTCTTGATGAGGATAATACTCTCATACCCAAGGTAAACAGAGAAATTGTAAAAATCCAGCGGGTCTCAGCGCCTGTGGGGCAGATGCAGCTGAAGAGCCTAATTGAATCCCATGTTGAAAAAACCGGTAGCAACAAAGGTGCAGCTATTCTGGAGGATTGGGACAAGTATTTACCGCTATTTTGGCAGCTGGTTCCACCTAGTGAAGAAGACACCCCTGAGGCTAATGCCAAGTATGACACAGCTTCTGCCGAGCAGGTCACTGTGCAGTCTGCTTAG 2559 0.449 MSASIIADTAQCFSTHQFACLIGYGASAVCPYLALETCRQWRLSNKTVNLMRNGKMPTVSIEQAQKNYCKAVKAGLLKILSKMGISLLSSYCGAQIFEVYGLGKEVVDLAFRGSVSKIGGLTFDELARETLSFWVKAFSEDTAKRLENFGFIQFRPGGEYHANNPEMSKLLHKAVRQKSQSAFSIYQQYLANRPVNVLRDLLEFKSNRAPIPVGKVEPASSIVQRFCTGGMSLGAISRETHEAIAIAMNRLGGKSNSGEGGEDPIRWKPLTDVVDGYSPTLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLANADQLEIKIAQGAKPGEGGQLPGKKVSMYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVASGVAKGNADIIQISGHDGGTGASPVSSIKHAGGPWELGLTESHQTLIENGLRERVILRVDGGFRSGVDVMMAAIMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQVRGILAQLGYEKLDDVIGLTDLLQPRDISLVKTQHLDLSYILSSVGLPKWSSTEIRNQEAHTNGPVLDDILLADPEIADAIENEKMVSKTIKIYNIDRAVCGRIAGVIAKKYGDTGFAGQLNITFTGSAGQSFGCFLTPGMNIHLVGEANDYVGKGIAGGELVVSPVEKTGFQPEDAAIVGNTCLYGATGGQVFVRGKAGERFAVRNSLAEAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYILDEDNTLIPKVNREIVKIQRVSAPVGQMQLKSLIESHVEKTGSNKGAAILEDWDKYLPLFWQLVPPSEEDTPEANAKYDTASAEQVTVQSA* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2174 852 Pfam Conserved region in glutamate synthase 161 512 IPR002932 GO:0006537|GO:0015930|GO:0016638
Dod01g2174 852 PANTHER BNAA03G19380D PROTEIN 511 840 - -
Dod01g2174 852 PANTHER BNAA03G19380D PROTEIN 1 510 - -
Dod01g2174 852 Gene3D Aldolase class I 154 511 IPR013785 -
Dod01g2174 852 SUPERFAMILY FMN-linked oxidoreductases 2 558 - -
Dod01g2174 852 Pfam Glutamate synthase central domain 2 102 IPR006982 GO:0006807|GO:0015930
Dod01g2174 852 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 511 840 - -
Dod01g2174 852 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 1 510 - -
Dod01g2174 852 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 571 833 IPR036485 GO:0016491
Dod01g2174 852 CDD GltS_FMN 164 534 IPR002932 GO:0006537|GO:0015930|GO:0016638
Dod01g2174 852 MobiDBLite consensus disorder prediction 829 852 - -
Dod01g2174 852 CDD gltB_C 577 827 IPR002489 GO:0016491
Dod01g2174 852 Gene3D - 558 833 IPR036485 GO:0016491
Dod01g2174 852 Gene3D Aldolase class I 2 153 IPR013785 -
Dod01g2174 852 Pfam GXGXG motif 602 784 IPR002489 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2174 Dod-Chr1 58729272 58743234 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2174 K00284 - gmx:548016 1633.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2174 01 58729272 58743234 Dod01g2174 01 58729272 58743234 ECH