Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2162 ATGGAGGATATTGTACAGAAACGTAATTGCATCTCTCTCTTGAGTTTGCCTGAATCCACTTTGGATTGCATTCTCAAGCGCCTTTCCCCAATGGAACTCATTAGAATGTCTCAAGTGTGTACTACTTTGAGGGATAGGTGTAGAAGTGATCATTTGTGGGAGAACCACATAAAGCAAAAATGGGGAACAGTGCTTGGTAATGTTGCTTACAAAGAGTGGCAATGGCATGTAACAGCAGCAAAGGAAGAAGGAAACATCTTGTATCAAATGATCAATCAGAATGGATCACTAGGGACTTTTACTGGTTCTTGGCCTATGCTATGTCTCGGTTCATATTTACAAGACTCTCAGCATATTCTTAGTGTTTCCTTGTCAAATTACTTTATGATGGCTTTGTATGTTTCTCTAGAGAGTGGAAAGTTCTGGTTTCCAGCACAAGTCTACAGGGGATGGTTGGTTAGCAACGTCTTGGTTAGCTATGATTCCAGAACTGATACCTTTCAAGCAAGGCAACAAATGGGTGGTTGGCGGACAATAGGAAATAACATCCCATGGGAAAAGGTGAGGGCTCCCCAAGTTGAAACCCATCCATGTGTTCGCCATGTCTCGGATTGTTTAGAGGACTTAAAGCCCGGGGATCATATAGAGATCCAATGGAAAGCGGGTGGTGAAATTCCTTATGATTGGTGGTATGCTCGTATTGATCACCTGGACTCATGCAATGGGAATGAGAATTGTTGCCGCTGTCAATACTCTGAGACATTGATCGTAGAGTTCAGGCAATACCATCTACAGTCAAGGATGAGAAGAGCAAAGCTACTAAGAATTAACTGCGGGGAACAAGGTGAAAATCGGGACGGAATCTATGGAGGAATCAGAAAGATTCACAGTGAGGAGGAGATTGAAAGATGGAAGCAACTCTTGCCACAGAATCAGACTCATCCTGTTCCTGTTTATATAGCTTGA 966 0.4275 MEDIVQKRNCISLLSLPESTLDCILKRLSPMELIRMSQVCTTLRDRCRSDHLWENHIKQKWGTVLGNVAYKEWQWHVTAAKEEGNILYQMINQNGSLGTFTGSWPMLCLGSYLQDSQHILSVSLSNYFMMALYVSLESGKFWFPAQVYRGWLVSNVLVSYDSRTDTFQARQQMGGWRTIGNNIPWEKVRAPQVETHPCVRHVSDCLEDLKPGDHIEIQWKAGGEIPYDWWYARIDHLDSCNGNENCCRCQYSETLIVEFRQYHLQSRMRRAKLLRINCGEQGENRDGIYGGIRKIHSEEEIERWKQLLPQNQTHPVPVYIA* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2162 321 SUPERFAMILY F-box domain 8 64 IPR036047 GO:0005515
Dod01g2162 321 Gene3D - 2 85 - -
Dod01g2162 321 ProSiteProfiles F-box domain profile. 10 56 IPR001810 GO:0005515
Dod01g2162 321 Pfam F-box domain 13 54 IPR001810 GO:0005515
Dod01g2162 321 PANTHER CYCLIN-LIKE F-BOX 10 312 - -
Dod01g2162 321 PANTHER ESTS AU081301(E20138) 10 312 - -
Dod01g2162 321 SMART fbox_2 16 56 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2162 Dod-Chr1 58521777 58523954 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2162 - - adu:107492604 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2162 01 58521777 58523954 Dod01g2162 01 58521777 58523954 ECH