Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2154 ATGAACGGAGGCCCATCTGGTTTCACAAATGCTCCGGTCACGAGGGCTTTCATCATCGCTTCGGCGCTTTTCACAATCTTCTTTGGGATCCAGGGTCGTTTCAACTCTCGTGGCTTGTCTTATCAGGATATTTTTGGAAAGCTTCACCTCTGGAAGTTGATTATGTCTGTATTTTCATTCTCTTCAACGCCGGAGTTGATGTTTGGACTGTATCTGCTATATTACTTCAGGGTTTTTGAGAGACAGATAGGTTCCAATAAGTACTCGGTCTTTATCGTGTTCTCTGTATTAGCTTCACTACTGTTTGAGGTGCTTGCTGTAGCATTCCTGAAAGATCCTTCAGCAAAGCTAGTCACTTCTGGACCTTATGGCCTTATATTTGCTTCATTCGTACCCTTTTTCCTTGACATTCCAGTTTCAACACGGTTTCGTGTGTTTGGTTTCCACTTCTCTGATAAGTCATTCATCTATCTAGCTGGTCTACAGCTTCTATTATCATCATGGAAAAGGTCCATATTACCAGGAATGTGTGGCATCCTTGCTGGGTCATTGTACCGTTTGAATGTCTTTTATATTCGCAAAGCAAAGTTCCCAGAGTTCATCTCATCATTCTTCTCACGAATTTCATTGCCATCTATGGGGAGTCCACGTGCAGCATCAACAAGGAACGTTGTGGGGAATGTACCATCCTATCCAACTCGCCAAATAGAGAGAAACTATGCTGTTCCAATGCAGTCTGCAGAACCATCAGAGGACTCGATCACTACCCTCGTTTCCATGGGCTTTGACAGGAATTCTGCAAGACAAGCACTAGTGCAGGCCAGAAATGATGTCAATGTGGCCACAAACATCCTTCTAGAGGCACAGTCCCACTAA 876 0.4395 MNGGPSGFTNAPVTRAFIIASALFTIFFGIQGRFNSRGLSYQDIFGKLHLWKLIMSVFSFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFIVFSVLASLLFEVLAVAFLKDPSAKLVTSGPYGLIFASFVPFFLDIPVSTRFRVFGFHFSDKSFIYLAGLQLLLSSWKRSILPGMCGILAGSLYRLNVFYIRKAKFPEFISSFFSRISLPSMGSPRAASTRNVVGNVPSYPTRQIERNYAVPMQSAEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2154 291 Pfam Rhomboid family 49 189 IPR022764 GO:0004252|GO:0016021
Dod01g2154 291 Gene3D - 9 188 IPR035952 -
Dod01g2154 291 Gene3D - 217 290 - -
Dod01g2154 291 SUPERFAMILY Rhomboid-like 11 187 IPR035952 -
Dod01g2154 291 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 248 288 IPR015940 -
Dod01g2154 291 SMART uba_6 250 287 IPR015940 -
Dod01g2154 291 SUPERFAMILY UBA-like 243 288 IPR009060 GO:0005515
Dod01g2154 291 Pfam UBA/TS-N domain 250 285 IPR015940 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2154 K25216 - gmx:100805217 511.916