Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2150 ATGAATAATACTGCTGAAAGACCACTTAATGGAGATGTAGAAGATGATGATGAAGATGATGCTAATGATGGAGGCCTTGAAGCCTGGGAGAGAGCTTATGCAGAAGATAGATCATGGGAGTCTTTGCAAGAGGATGAATCTGGACTTCTTCGCCCCATTGATAATACAGCCATTTACCATGCCCAATATCGCAGGCGCCTTCGTGCCCTTGCTTCCACAGCAGCTACTGCTCGAATCCAGAAGGGTCTTATTCGATACCTATACATTGTTGTTGACCTGTCCAAGGCAGCTTCAGAGACAGATTTTCGACCAAGTAGGATGGCTGTGATTGGGAAACAAGTTGAAGCATTTATCAGGGAGTTCTTTGATCAGAATCCACTTAGTCATGTTGGTCTGGTGACTATAAAAGATGGGATGGCTTATTGCTTAACAGATCTTGGTGGCAGTCCTGAGTCCCACATTAAAGCTTTGATGGGTAAGCTGGAATGCTCAGGTGATGCCTCCCTACAAAATGCATTAGAGCTTGTTCTTGGCCATCTAAATCAAATTCCCTCATATGGTCATCGAGAAGTTCTGATCTTATATTCAGCCCTCAGTACCTGTGATCCTGGTGATCTCATGGAAACCATCCAAAACTGTAAAAAGAGTAAAATAAGGTGCTCTGTCATTGGTCTTGCTGCTGAAATGTTTATATGCAAGCATCTCAGCCAAGAAACTGGAGGAACTTACTCTGTTGCACTAGATGAGTCCCACTTTAAAGAGTTAATTCTAGAGCATGCTCCACCACCTCCAGCAATAGCAGAGTATGCTACTGCTAATTTAATTAAGATGGGTTTTCCACAAAGAGCAGCTGAGAGCTCTGTCGCAATTTGTACATGCCATGAGGAAGCTAAGACTGGAGGGGGATACACTTGCCCAAGATGCAAAGTTCGTGTTTGTGAGCTTCCCACTGAATGTCGTATCTGTGGATTGACACTTATTTCTTCACCCCATTTGGCAAGGTCATATCATCATCTCTTTCCTATAGTGCCCTTTGATGAGGTCTCTCCATCATCTTTAAATAGCACAAGTCACAGTTTTTCCAGCACTTGTTTTGGCTGTCAGCAAAGCCTTCTTGGTCAGGGTAAGTTTTTTCAGAAAGGTAGTCAAGGTTGCGATTTTTTCATAAATTATCATTTTGGTCAATTTACAATTTTATCTTGTTGGCCAATATGCTATGTCAAATATAGACTCATATCATACAGCTTTAAGGGCAAAATAATAGTAAAGATAGCAAATTGA 1281 0.4176 MNNTAERPLNGDVEDDDEDDANDGGLEAWERAYAEDRSWESLQEDESGLLRPIDNTAIYHAQYRRRLRALASTAATARIQKGLIRYLYIVVDLSKAASETDFRPSRMAVIGKQVEAFIREFFDQNPLSHVGLVTIKDGMAYCLTDLGGSPESHIKALMGKLECSGDASLQNALELVLGHLNQIPSYGHREVLILYSALSTCDPGDLMETIQNCKKSKIRCSVIGLAAEMFICKHLSQETGGTYSVALDESHFKELILEHAPPPPAIAEYATANLIKMGFPQRAAESSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSPSSLNSTSHSFSSTCFGCQQSLLGQGKFFQKGSQGCDFFINYHFGQFTILSCWPICYVKYRLISYSFKGKIIVKIAN* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2150 426 SUPERFAMILY vWA-like 81 248 IPR036465 -
Dod01g2150 426 Pfam Ssl1-like 90 280 IPR007198 -
Dod01g2150 426 SMART VWA_4 84 260 IPR002035 -
Dod01g2150 426 TIGRFAM ssl1: transcription factor ssl1 302 370 IPR012170 GO:0000439|GO:0006289|GO:0006351
Dod01g2150 426 Gene3D von Willebrand factor, type A domain 80 265 IPR036465 -
Dod01g2150 426 MobiDBLite consensus disorder prediction 1 26 - -
Dod01g2150 426 PIRSF TFIIH_SSL1 2 391 IPR012170 GO:0000439|GO:0006289|GO:0006351
Dod01g2150 426 CDD vWA_transcription_factor_IIH_type 82 264 IPR007198 -
Dod01g2150 426 ProSiteProfiles VWFA domain profile. 86 225 IPR002035 -
Dod01g2150 426 PANTHER GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 20 374 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2150 K03142 - gmx:100803090 666.381