Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2147 ATGATTGCAGCAAAGGGTGTGCGTAAGGTTATGCATAGGGGCCGATTCTTGAAGCTTCAAGCAGTTCTAAAGCTGCCATACTTTGGGCAACCCCAACTTGTTACTGGGTTCTCAACATTTCCCTCTTGTGCTGCCATGGATGGAGCTAATGGAGTAGAGTCTCTTGATTTTAGGGAAAATACAAAGACAAGAGAACAAAGGACTGCATTTGACAAAGACAATATAAAAGGTTTGTCTCAGTGCTTGAATTGGACTTCAAGGCCAAATGATAATTATAATGCTGCCAGCTACTTGGTGAACCGTCATTTTACATCTGATCGGAATGATAGATGCACAAAGGAGTTCTCAAGTAAGCTTCTTAAAAGTATTCCAGATTATGTAAAGATAGTGGAGGTTGGTCCAAGGGATGGATTGCAAAATGAGAAGTCTATTGTTCCTACTGATGTTAAAGTTGAGTTGATAAGACTGCTAGTTTCTTCTGGGTTGTCTGTTGTTGAGGCAACAAGTTTTGTCTCACCAAAATGGGTACCACAGTTAGCAGATGCAAAGGATGTATTGGCAGCAATTCAAGATGTGAAAGGTGCTAGCTTTCCTGTATTAACTCCAAACCTCAAAGGTTTTGAGGCAGCTGTTGCTGCTGGGGCTAAGGAATTGGCTGTTTTTCCTGCAGCCTCTGAATCATTCTCTAAAGCAAATCTCAATTGTGGCATTGAAGATAATCTTGCTCGTTGCCGTGACATTGCTGTAGCTTCTAGAAGCCTCTCAATCCCTGTTCGCGGATATATATCGTGTGTTGTGGGATGTCCTCTAGAAGGAAATGTTGCTCCAGCTAAAGTAGCATATGTGGCAAAGTCACTTTATGAGATGGGTTGCTCAGAGATTTCACTAGGAGATACAATTGGTGTTGGTACACCGGGTACTGTCATTCCAATGCTTGAAGCTGTTCTTGATGTTGTTCCAGTTGACAAGCTTGCTGTCCACTTTCATGATACTTACGGTCAGGCACTTTCAAATACCCTAATTTCACTTCAGATGGGGATCAGCACGGTGGATTCATCCGTTTCTGGTCTTGGGGGTTGTCCATATGCCAAGGGTGCAACTGGTAATGTCGCCACTGAGGATGTTGTTTACATGCTGAATGGACTTGGAGTTAAAACCAATGTGGACCTTGGAAAGCTCATGCAGGCTGGTGATTTCATCTGCAAGCATTTAGGGCGTGCATCTGGATCAAAAGCAGCAACTGCATTGAGTAAAGTTACAGCTCATGCTTCCAAACTGTGA 1281 0.4309 MIAAKGVRKVMHRGRFLKLQAVLKLPYFGQPQLVTGFSTFPSCAAMDGANGVESLDFRENTKTREQRTAFDKDNIKGLSQCLNWTSRPNDNYNAASYLVNRHFTSDRNDRCTKEFSSKLLKSIPDYVKIVEVGPRDGLQNEKSIVPTDVKVELIRLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAAIQDVKGASFPVLTPNLKGFEAAVAAGAKELAVFPAASESFSKANLNCGIEDNLARCRDIAVASRSLSIPVRGYISCVVGCPLEGNVAPAKVAYVAKSLYEMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPVDKLAVHFHDTYGQALSNTLISLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMQAGDFICKHLGRASGSKAATALSKVTAHASKL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2147 426 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 55 426 IPR043594 GO:0016833
Dod01g2147 426 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 55 426 - -
Dod01g2147 426 CDD DRE_TIM_HMGL 129 402 - -
Dod01g2147 426 Gene3D Aldolase class I 120 419 IPR013785 -
Dod01g2147 426 SUPERFAMILY Aldolase 122 422 - -
Dod01g2147 426 Pfam HMGL-like 127 400 IPR000891 GO:0003824
Dod01g2147 426 ProSiteProfiles Pyruvate carboxyltransferase domain. 127 394 IPR000891 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2147 Dod-Chr1 58265988 58272379 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2147 K01640 - gmx:100801507 648.277