Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2143 ATGCTACTTCATTCACGCATAATAATGATTGCATTAGCAACATTAATTGTTGTACTTTCACAAACACTTGTGGGGGTGAACTCAGCTCCACAAGGTGATAAGATAAGCAGTTTGCCGGGTCAGCCACCAGTCACATTCCAGCAATATTCTGGTTATATTACTGTGGATGACAACCAAGAGAGAGCTTTGTTTTACTACTTTGTTGAAGCAGAAGATCACCCTTATTCCAAGCCACTAGTTCTATGGTTGAATGGAGGGCCTGGTTGTTCGTCTGTTGGAGTTGGAGCTTTTGCTGAGCATGGCCCTTTTAGACCGGGTGACAATGCGACTCTTGTGAAAAATGATTATAGCTGGAACAAAGAAGCAAATGTGCTATATTTGGAATCGCCAGCTGGTGTTGGTTTCTCCTACTCTAGCAATCAATCTTTCTATGACTTTGTCAATGATGAAATTACAGCAAGGGATAATCTTGTCTTTCTGCAGCGCTGGTTTACTCAATTTCCTGAGTACTCTAAAAACGATTTCTTTATCACTGGGGAGAGCTACGCAGGTCACTATGTTCCACAACTTGCACAACTTATTGTTCAAGCCAACAATACATTCAATCTTAAGGGGATAGCTCTAGGGAATCCTCTTCTGGATTTTAATGTTGATTTTAACTCTAACGCCGAGTTCCTATGGTCCCACGGGCTGATATCAGATTTAACCCGCGACTTCTTCAGTATAGTATGCAATTATTCTACAATTACGAGACAATATATAAATGGGAATCTTAGTGGCGATTGTGCAAAAGTAGCCAAGCAAGCATCCACTGAGATTTCCAAATACATTGATGCATATGATGTCACTCTTGATGTTTGTTTGTCATCAGTGAACCAACAAGCTCAAGTGCTCATGAACTTCAATCAACTGCAAGAGACAGAACACATAGATGTCTGTGTGGACGACAAAACAGTGATGTACTTAAACAGGAAAGAAGTGCAAGAAGCGCTCCATGCTAAGCTTGTTGGAGTTGGCAACTGGTCAACTTGCAGCAACGTTCTCAAGTATGACCTTACGAATCTAGAGATATCAACACTTTCTATTCTAGGTTCACTTGTTGGGTCTGGTGTCCGGGTTCTAGTGTACAGTGGAGACCAAGATTCAGTGATCCCATTAATTGGATCACGATCTTTGGTGGATTCTTTGGCCAACCTGCGAATGGGGCTAAACACAACAGTGCCCTATAGTGCATGGTTTGAGGGAAAACAGCTCCTTTTACTCAACCAGCAAGATCACTAG 1281 0.4184 MLLHSRIIMIALATLIVVLSQTLVGVNSAPQGDKISSLPGQPPVTFQQYSGYITVDDNQERALFYYFVEAEDHPYSKPLVLWLNGGPGCSSVGVGAFAEHGPFRPGDNATLVKNDYSWNKEANVLYLESPAGVGFSYSSNQSFYDFVNDEITARDNLVFLQRWFTQFPEYSKNDFFITGESYAGHYVPQLAQLIVQANNTFNLKGIALGNPLLDFNVDFNSNAEFLWSHGLISDLTRDFFSIVCNYSTITRQYINGNLSGDCAKVAKQASTEISKYIDAYDVTLDVCLSSVNQQAQVLMNFNQLQETEHIDVCVDDKTVMYLNRKEVQEALHAKLVGVGNWSTCSNVLKYDLTNLEISTLSILGSLVGSGVRVLVYSGDQDSVIPLIGSRSLVDSLANLRMGLNTTVPYSAWFEGKQLLLLNQQDH* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2143 426 Pfam Serine carboxypeptidase 39 414 IPR001563 GO:0004185|GO:0006508
Dod01g2143 426 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Dod01g2143 426 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Dod01g2143 426 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Dod01g2143 426 SUPERFAMILY alpha/beta-Hydrolases 36 414 IPR029058 -
Dod01g2143 426 PANTHER CARBOXYPEPTIDASE 20 418 - -
Dod01g2143 426 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Dod01g2143 426 Gene3D alpha/beta hydrolase 29 424 IPR029058 -
Dod01g2143 426 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 418 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2143 Dod-Chr1 58208444 58212864 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2143 K16297 - gmx:100793889 602.823