Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2127 ATGGATTCATCGTCTGTCTCCAACGACGCCGTTTTGAAGGAGTCAATGGTTGACCCCTTCTTGGTGGAGGCTCTCCAGAACCCTCGTCATCGCCTCACCATTTTGCGGATGGAGCTGGATATTCAGAGGTTTCTGAGCAATGCTGATCAGCAGCATTTTGAGTTCCAACATTTCCCTTCTTCCTATCTTCGATTGGCTGCACATCGAGTTGCTCAACACTATGGTATGCAAACAATGGTTCAAGATAGTGGCTTAGATGGTCAGGGAAGTAAAATTCTGGTGAGGAAGTTAGCAGAAAGCAAGTATCCTGTGGTTCGCTTATCTGAAATACCTGCAAAACAGTTGGGAAATGATAAATCTGAGCAGAAAAAAATTGTCCTTAAACCTAGGCCGTCTAAAACTAGTTTAAATGAAGCTAATGAATCTGGGATGAAGGGAAATCCTTTGAGAAGTGTGGAAGAGAGGAAAGAGGAATATGATCGGGCACGAGCACGTATCTTTAGTAGCTCTAGAAGCTTTGATTCAGGAGATACTTCATCAGTGGTCCCTATAGATGGGAAAAATTCTTTTATGAGCAAGGATGAGAATGAAACTTGCAAGAACCCCATGGCTGATCCAGAAAGATGCAATAGTGTCCGGGATGGTAATTCTACCCGAGTTGCCATTTTCAGAGATAGGGAAAAGGATCGTAGCGATCCAGATTATGATCGTAGCTATGGAAGGTATGCTAGGAGTATTCCGGCCTCTGCTGTTAACTTGGTGCCTTTTAATTTGCAAAAAGCTCAACCTTCATTTGCTCCATATGACACTACCTTTAATCAGTTGGGTCAGATGTCACAAACTCAGGCTACACTTGGTTATGGACCTCCTTCAAGCCCGATGATTAGTCCTTTTGGTAACACAGGATTGAACCAGACAGCTAGGGATGTTGCTTACCTACAGTGGCCAAGTGCTACAATGATGTATGTACATTCATATGACCAATTTAGGCATGCTGTTTTCCAGGCTCCATTTGGTCAACAGCCGTTGAGCTTTGACTATTCACAGAACCACTAG 1056 0.4356 MDSSSVSNDAVLKESMVDPFLVEALQNPRHRLTILRMELDIQRFLSNADQQHFEFQHFPSSYLRLAAHRVAQHYGMQTMVQDSGLDGQGSKILVRKLAESKYPVVRLSEIPAKQLGNDKSEQKKIVLKPRPSKTSLNEANESGMKGNPLRSVEERKEEYDRARARIFSSSRSFDSGDTSSVVPIDGKNSFMSKDENETCKNPMADPERCNSVRDGNSTRVAIFRDREKDRSDPDYDRSYGRYARSIPASAVNLVPFNLQKAQPSFAPYDTTFNQLGQMSQTQATLGYGPPSSPMISPFGNTGLNQTARDVAYLQWPSATMMYVHSYDQFRHAVFQAPFGQQPLSFDYSQNH* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2127 351 MobiDBLite consensus disorder prediction 177 213 - -
Dod01g2127 351 CDD R3H_encore_like 30 96 - -
Dod01g2127 351 Gene3D - 6 132 IPR036867 GO:0003676
Dod01g2127 351 SUPERFAMILY R3H domain 15 118 IPR036867 GO:0003676
Dod01g2127 351 PANTHER OS05G0411600 PROTEIN 10 351 - -
Dod01g2127 351 ProSiteProfiles R3H domain profile. 31 98 IPR001374 GO:0003676
Dod01g2127 351 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 10 351 - -
Dod01g2127 351 Pfam SUZ domain 122 170 IPR024771 -
Dod01g2127 351 Pfam R3H domain 33 84 IPR001374 GO:0003676
Dod01g2127 351 SMART R3H_4 15 97 IPR001374 GO:0003676
Dod01g2127 351 MobiDBLite consensus disorder prediction 130 153 - -
Dod01g2127 351 ProSiteProfiles SUZ domain profile. 101 171 IPR024771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2127 Dod-Chr1 57937611 57941966 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2127 - - gmx:100814835 577.785