Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2120 ATGGCAGAGGTGTCGATGTGTAGCAGCAGCAGCTCGGAACTGAGCCCAGACGAAGAGAGGATTATGATCAGAGACATTGCTCTCACTGCCCAAGCTAACAGCAAAGAAGGCGACACCTTCTTCTTAATCACCCAGAGATGGTGGCAACATTGGATTGAATATGTGAACCAAGAACAGACAAACAATTCATATGATGGATCTTCCATCTTGGAGCATGGTGATTTGGCCAGTGCATTAAAGAGGCCAGCTGGTATTGATAATTCTGATCTGATAGATGATGCTGTGTCAGAGGACTCTTGCTCGGGTGTTGAGATTCATGATACTCTTTTAGAAGGCCGTGACTATGTATTACTTCCCCAAGAAGTTTGGAATCAATTATATGCATGGTACGGAGGTGGACCTACATTGGCAAGGAAAGTTATCAGCTCAGGTCTTTCCCAGACAGAATTGGCCGTAGAGGTCTATCCTTTACGGCTTCAGTTACTTGTGTTGCCAAGAAATGATCGTACCATTATTCGAATAAGCAAGAAGGAAACCATTGGACAGCTTCACAGAAAAGCTTGCGAAATATTTGATCTTCAACCGGACCAAGTATGTATTTGGGATTACTACGCCTGTCGAAAGCATGCCTTGATGAATGATATGGACAAAACACTAGATGATGCCAATGTACAAATGGACCAGGATATTCTTGTTGAGGTCATCAACAATACAAATAGCACAAGCTCTGCTCAAGAAAATGGATCTGCACAGAATGCACATAGGGAAGCAAGTTCTGTTCTTGTGGAGCCTTCAAACTCAAGTTTATCAATTGCTGGTGGCCTGTCTGCTAGCAGGGGTGCATCTAGAAGCTACAATACGGAGCTTTCTTCTTCTCAGAACCTGAATTCTCTGGCCAGAGATGTTGAAAACCCTTATGGAACCAGCGGTGTCACCACAAGAGGTTCGTTGAGCGGTCTCACGGGGTTGCTGAATCTTGGCAACACTTGTTTCATGAATAGTGCAATACAGTGCCTTGTTCATACACCTGAATTTGCTAGGTACTTTAGGGAGGACTATCATCGAGAGATAAATTGGCAAAATCCATTGGGCATGGTTGGTGAGCTAGCCCTAGCATTTGGTGAGTTGCTTCGAAAACTGTGGGCACCTGGGCGAACACCAATTGCTCCTCGGCCTTTCAAAGCAAAGCTTGCTCGCTTTGCACCTCAGTTCAGTGGGCACAATCAGCATGATTCTCAGGAGCTTTTAGCATTTCTGCTGGATGGTCTCCACGAAGACTTGAATCGTGTAAAACACAAACCATATATCAAGTCTCGAGATGCCGATGGTCGACCTGATGAAGAAGTGGCTGATGAGTATTGGGCAAATCATATTGCTCGCAATGATTCCATTATTGTTGATGTTTGCCAGGGGCAATACAAGTCAACATTGGTTTGTCCAGTATGCAATAAAGTCTCTGTCACATTTGATCCTTTCATGTATCTTTCCTTGCCACTCCAATCCACCTCCAGCAGGACCATGACAGTCACAGTTTTTACTTGTGATGGAACTGCCCCGCCATCTCCTTGCATTGTAACTGTGCCTAAGCAGGGACGCTGCAGAGATCTGATTCAGGCGCTTAGCAATGCTTGCTCATTGAAGCATAATGAGAGACTATTGCTTGTGGAGGTACGAAACCATTTAATTCATAAATTTCTTGAGGATCCTCTTCTGTTGTTGTCAACTATCAAAGATGATGACCGTCTTGCTGTTTACAAGATTCCTAAGATAGACAAAAACACAAAGTATCTGCAGTTAATACACCGCCGTAGAGAGCAGAGCGGTGACTCTCAGACTGTATCAGGATGGAAACCGTATGGAACACCTATTGTTTCTTTAATCTCATGTGATGATGCAGTTACAAGAGGTGATATACAATTGATTGTCAATCGTATGCTCTCCCCTCTCCTGAGGAAAGGTGGCAATGCAGAACATACTATTACTTCTGAAACCAGCATCCTCAAAGCTACCGGAAACCAAAGCAGTCTCACTGCTTCTGGTGATGAATCTGCTGCCAACGTGGTGTCAAATTCGGTAAGTAAGGATGGTACTGATTCAAAGGCACTGCGGACACCAGCATTACCTCTTCTTTTGGTAGATGAAAGCAGTGCTTGCATTGATCTTTCAATGGGAGAGGAGAAAGTGGTTAAACTGCCACCTTCAATATCAACAGTCCTAGTGTATATGGATTGGTCTCAGAAGCTTCTGGAGAAGTATGATACTCATCCACTCGAGACTTTACCAGAAGTTTTGAAATATGGGCCTGTTTCCAAGAAAGCTCGTACTGAACCCCTCTCCTTGTACACCTGTTTAGAAGCTTTTCTGCGTGAAGAACCTCTGGTGCCTGAAGATATGTGGTACTGTCCCCAATGCAAGGAGAGACGACAAGCAAGCAAAAAGCTTGACTTGTGGAGGCTCCCAGAGGTTCTGGTCATCCATTTGAAGAGGTTCTCATACAGCAGGTCAATGAAACATAAACTAGAGACTTTTGTTAACTTCCCCATTCATGACTTTGACTTGACGAATTACGTAGCCAACAAAAACAACTCGCGGCGTCAACTGTATGAACTGTATGCCCTTACAAACCATTATGGCAGTATGGGTAGTGGTCATTACACTGCACATATCAAGCTTTTAGACGAAAATAGGTGGTACAATTTTGATGATAGCCACATATCACCTATAAGTGAGGATGATGTGTGCACCGCGGCTGCCTATGTTCTATTTTACCGGAGGGTGAAGACGGACGATGCTTCTGTCAGCAACGGCACTTAG 2814 0.4424 MAEVSMCSSSSSELSPDEERIMIRDIALTAQANSKEGDTFFLITQRWWQHWIEYVNQEQTNNSYDGSSILEHGDLASALKRPAGIDNSDLIDDAVSEDSCSGVEIHDTLLEGRDYVLLPQEVWNQLYAWYGGGPTLARKVISSGLSQTELAVEVYPLRLQLLVLPRNDRTIIRISKKETIGQLHRKACEIFDLQPDQVCIWDYYACRKHALMNDMDKTLDDANVQMDQDILVEVINNTNSTSSAQENGSAQNAHREASSVLVEPSNSSLSIAGGLSASRGASRSYNTELSSSQNLNSLARDVENPYGTSGVTTRGSLSGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHREINWQNPLGMVGELALAFGELLRKLWAPGRTPIAPRPFKAKLARFAPQFSGHNQHDSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQSTSSRTMTVTVFTCDGTAPPSPCIVTVPKQGRCRDLIQALSNACSLKHNERLLLVEVRNHLIHKFLEDPLLLLSTIKDDDRLAVYKIPKIDKNTKYLQLIHRRREQSGDSQTVSGWKPYGTPIVSLISCDDAVTRGDIQLIVNRMLSPLLRKGGNAEHTITSETSILKATGNQSSLTASGDESAANVVSNSVSKDGTDSKALRTPALPLLLVDESSACIDLSMGEEKVVKLPPSISTVLVYMDWSQKLLEKYDTHPLETLPEVLKYGPVSKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDFDLTNYVANKNNSRRQLYELYALTNHYGSMGSGHYTAHIKLLDENRWYNFDDSHISPISEDDVCTAAAYVLFYRRVKTDDASVSNGT* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2120 937 Pfam Ubiquitin carboxyl-terminal hydrolase 321 923 IPR001394 GO:0004843|GO:0016579
Dod01g2120 937 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 5 12 936 - -
Dod01g2120 937 SMART dusp 33 144 IPR006615 GO:0004843
Dod01g2120 937 Gene3D Cysteine proteinases 308 544 - -
Dod01g2120 937 Gene3D - 5 154 IPR035927 -
Dod01g2120 937 ProSiteProfiles DUSP domain profile. 14 141 IPR006615 GO:0004843
Dod01g2120 937 Gene3D - 155 243 - -
Dod01g2120 937 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 868 885 IPR018200 GO:0004843|GO:0006511
Dod01g2120 937 MobiDBLite consensus disorder prediction 673 697 - -
Dod01g2120 937 Gene3D Cysteine proteinases 745 934 - -
Dod01g2120 937 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 322 337 IPR018200 GO:0004843|GO:0006511
Dod01g2120 937 SUPERFAMILY DUSP-like 15 141 IPR035927 -
Dod01g2120 937 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 321 926 IPR028889 -
Dod01g2120 937 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 12 936 - -
Dod01g2120 937 SUPERFAMILY Cysteine proteinases 319 926 IPR038765 -
Dod01g2120 937 CDD Peptidase_C19R 770 924 - -
Dod01g2120 937 Pfam DUSP domain 37 141 IPR006615 GO:0004843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2120 Dod-Chr1 57807083 57815911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2120 779 932 Miscellaneous Gene Families AT4G31670 34.395 1.08e-17 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2120 - - aprc:113861233 1626.68