LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod01g2111	ATGGGAAAGGCCGACGAAGAAAGGCAGCCTGCAGCTCCGTCCGAGGATCTGCCGCGGAATGCGGAGGCGGAGTGTCGGTGCAGGTGGTGCTGCTGTTGCTCTTCTTCTTGGATTCGGAGAGTCGTAGGTTTGAGATGCATGGTGGTGTTGCTATTGTCGTTCGCCGTGTTCCTCTCTGCTCTTTTCTGGTTGCCACCGTTTCTTCGCCTCGCAGATCGCAACAATCTGCATGCCGATTCCACATTCAGAGGTCATGATATTGTTGCAAGCTTTATTGCTAACAAGTCAGTCTCTTTGCTAGAAGACAACATCATGCTGCTCACTGATGAAATTTTTGACGAGATAGAAGCTCCCTCTACTAAAGTGGTCATCTTATCTCTGTATCCCTTACCTGGGTCAAACATGACCAAAGTGGTGTTTGCAGTTGATCCTAATGGTCAAAACTCAGAAATGTCTTCTGCTGTCATTAGTTTGGTAAGATCATCATTTCAAACCCTGGTTATACGCCAATCAGTTCTCCAGCTCACTCCGTCCTTGTTTGGACATGCCTTCAATTTTGAAGTGCTGAAATTTAAGGGAGGAATTACTATAATTCCAGAGCAAAGTGCATTTCCTCTTCAGACTAGGCAAACACTATTCAGTTTTACTTTGAATTTCTCCATTGATCAAATACAGTCAAATTTTGATGAGCTGACGAGTCAGCTAAAGTCTGGATTACATCTGGCACCCTTTGAGAACTTGTATGTCATCTTATCGAATAGTGAAGGTTCAACAGTAGCTACTCCTACCATTGTTCAATCATCTGTTCTACTCGCAATTGGAATTTCTCCATCAAAAGAGAGGCTTAAGCAACTGGCGCAAACCATCATGGGACCTCATAACCTTGGTTTGAATCACACTGAATTTGGTAAGGTAAAGCAGGTCCGACTTTCGTCAATCTTGCAACACTCCCTTCATGGCGGCAAAGGTGGTGGCTCTGCCTGGTCACCTTCTCCTGCTCCACTGCCTCATCCATCACATCACCACCACCACCACCACCATCACCACCACCACCAGCATCATCATCACCATGATACCCATCTAACTCCAGCAACTTCTGTGCCTGCACCTGCACCTACACCTACAACTTCTCCTTTCCCTGCACCTGCACCTGCACCTGCAACTTCTCCTACACCTGCACCTGCAACTGGTGAGGGCGCAACTCCACCTAAGGTTGGTTCTCCTCATGCTGCAAGAACTGTGCCTGCACCGGGGAAAAGTCCTCAAGTGCAGCCTCCTAATTGTCGATTTAAGTATAGAAGGAGGTCTACCCATAATGCTGGGATGCATTCTCATCTAACACCTGCTCCTACTCCTAGTATTGTTCCACGTTATCCTGTTCCTGTTGCCTCACCAAAGCCTCATGTTGACCCCCCAGCTTATGTCCCTCATTCAGTACCTGCTTTGAGTCCTTTACCAAATGTGGCTTTCGCTCATGCTGAGCCCCCTCGTAAGAATGAGCCTGCTCCCGGAGGTTCTCACACACACATTAATGGGTCATCATTATCTGCATGTGAGTATACTAAATGA	1569	0.4716	MGKADEERQPAAPSEDLPRNAEAECRCRWCCCCSSSWIRRVVGLRCMVVLLLSFAVFLSALFWLPPFLRLADRNNLHADSTFRGHDIVASFIANKSVSLLEDNIMLLTDEIFDEIEAPSTKVVILSLYPLPGSNMTKVVFAVDPNGQNSEMSSAVISLVRSSFQTLVIRQSVLQLTPSLFGHAFNFEVLKFKGGITIIPEQSAFPLQTRQTLFSFTLNFSIDQIQSNFDELTSQLKSGLHLAPFENLYVILSNSEGSTVATPTIVQSSVLLAIGISPSKERLKQLAQTIMGPHNLGLNHTEFGKVKQVRLSSILQHSLHGGKGGGSAWSPSPAPLPHPSHHHHHHHHHHHHQHHHHHDTHLTPATSVPAPAPTPTTSPFPAPAPAPATSPTPAPATGEGATPPKVGSPHAARTVPAPGKSPQVQPPNCRFKYRRRSTHNAGMHSHLTPAPTPSIVPRYPVPVASPKPHVDPPAYVPHSVPALSPLPNVAFAHAEPPRKNEPAPGGSHTHINGSSLSACEYTK*	523

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod01g2111	522	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	1	504	-	-
	Dod01g2111	522	MobiDBLite	consensus disorder prediction	367	391	-	-
	Dod01g2111	522	MobiDBLite	consensus disorder prediction	337	358	-	-
	Dod01g2111	522	MobiDBLite	consensus disorder prediction	506	522	-	-
	Dod01g2111	522	PRINTS	Proline rich extensin signature	378	394	-	-
	Dod01g2111	522	PRINTS	Proline rich extensin signature	362	374	-	-
	Dod01g2111	522	PRINTS	Proline rich extensin signature	414	426	-	-
	Dod01g2111	522	PRINTS	Proline rich extensin signature	465	481	-	-
	Dod01g2111	522	PRINTS	Proline rich extensin signature	441	462	-	-
	Dod01g2111	522	MobiDBLite	consensus disorder prediction	491	522	-	-
	Dod01g2111	522	PANTHER	F20B24.21	1	504	-	-
	Dod01g2111	522	MobiDBLite	consensus disorder prediction	316	428	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod01g2111	Dod-Chr1	57654154	57659405	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod01g2111	-		-	gmx:100792490	548.895