Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2109 ATGACTGCTCAGACCCAGGAAGAGCTTCTTGCTGAGCACCTCGAACAGCAGAAGATCCATCATGATGAGCCTGTAGTTGAGGATGAGGATGATGATGATGATGAGGAGGAGGACGATGATGATGATGAGGAGGACAATGCTGAAGGACAAGAAGGTGAAATAGGTAGATCCAAGCAGACCAGGAGTGAAAAGAAGAGTCGCAAGGCAATGCTTAAACTGGGAATGAGACCTGTATCAGGCGTCAGCCGTGTAACAGTAAAAAAGAGCAAGAATATCCTGTTCGTTATATCAAAACCAGATGTTTTCAAGAGCCCAACTTCTGACACATACATTATATTTGGGGAAGCTAAGATTGAAGATTTGAGCTCACAGCTACAAACTCAGGCAGCAGAGCAGTTCAAGGCTCCTAATTTGAGTAATGCAGCATTGAAGTCTGAATCCTCTAGTGTTGCACAAGATGATGAGGATGTTGATGAGACTGGTGTAGATCCCAAGGACATAGAGTTAGTGATGACTCAAGCTGGTGTGTCGAGATCAAGAGCTGTTAAAGCTCTCAAAGCTGCCGGGGGCGACATTGTTGCTGCCATTATGGAGCTAACTAATTGA 606 0.4488 MTAQTQEELLAEHLEQQKIHHDEPVVEDEDDDDDEEEDDDDDEEDNAEGQEGEIGRSKQTRSEKKSRKAMLKLGMRPVSGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNLSNAALKSESSSVAQDDEDVDETGVDPKDIELVMTQAGVSRSRAVKALKAAGGDIVAAIMELTN* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2109 201 MobiDBLite consensus disorder prediction 1 72 - -
Dod01g2109 201 Pfam HYPK UBA domain 161 200 IPR044034 -
Dod01g2109 201 MobiDBLite consensus disorder prediction 26 49 - -
Dod01g2109 201 SMART NAC_2 63 119 IPR002715 -
Dod01g2109 201 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 3 201 IPR016641 GO:0005854
Dod01g2109 201 MobiDBLite consensus disorder prediction 50 70 - -
Dod01g2109 201 Pfam NAC domain 63 118 IPR002715 -
Dod01g2109 201 MobiDBLite consensus disorder prediction 137 162 - -
Dod01g2109 201 Gene3D - 69 122 IPR038187 -
Dod01g2109 201 CDD UBA_NAC_euk 164 200 - -
Dod01g2109 201 Gene3D - 162 199 - -
Dod01g2109 201 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3 201 - -
Dod01g2109 201 MobiDBLite consensus disorder prediction 11 25 - -
Dod01g2109 201 ProSiteProfiles NAC A/B domain profile. 60 125 IPR002715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2109 Dod-Chr1 57618594 57620646 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2109 K03626 - gmx:100791446 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2109 01 57618594 57620646 Dod01g2109 01 57618594 57620646 ECH