Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2104 ATGAACCTGTTTCCAATCTTCAGAAACAGGACCTTCCCTTCACCGACAACCTCACCCACCAGCAACAACAACCCATTCACCCCTTTCTTCCTCCTCTTCCAAAGGAGATGGAAGAAACCAACAGTCTCCGCGCAAACCCGCCTGGAGGACAGGGTTCGGGACCCACACCTAGACAAGCTCATGTCCCACGTCGCCAAACTCAAACTCATCCTCGGAACCCGACACCTCATGTCAACCCGAAAGCGCGGCCCCTTCGTCTCCCTCCAGCTCATGTCCCGCTGGAGGAACGTCCTCGGACTCAACGTCCCCGTCGCCCAGTTCCTCAACAAATACCCCCACGTTTTCCGCGTGTTCATTCACCCTTTCAGGAGGAACCCCTGTTGCAGGCTCACAAAAAAAATGGAGGAGCTGATTGCCCTTGAAGAGGTTGTTGTTGTTGAACAGGAAGTTGAGGCTGTGAAGAGGGTGAAGAAGCTGCTTTTGATGTCCGTGAATGGCACGCTACGCGTCCACGCGTTGAGGATGATCAGGAGGGAACTAGGCCTCCCTGATGATTTCAGAGACTCCATTCTGGGAAAGTACAGTGGTGATTTCAGGCTTGTTGATTTGGAGGTTGTGGAATTGGTTCATAAGGATTGTGATTGTGATGATGATAAATTGGGGGTTGCTGAGGTTGAAAAGTGGAGGGAGAGAGAGTACAATGAGAAGTGGTTGAGTGAGTTTGAGACAAAATTTGCATTCCCCATCAGTTTCCCAACTGGGTTCAAGATTGAGAGAGGGTTCAGGGATAAGCTGAGGAACTGGCAGAGGCTTCCATATACAAAACCTTATGAGAGGAGAGAGGCTGCTGTTCGCGTTAGGACTTGCGGCGGCATCGATCGGTATGAGAAGAGGGCTGTTGCTGTTCTTCATGAGTTGCTGAGCTTGACTGTGGAGAAGATGGTTGAGGTTGATCAGTTGGTTCATTTTAGGAGGGACTTGGCGGTTGAGGTTAATTTGCGCGAGCTGATTCTGAAGCACCCTGGGATATTTTACATATCCACAAAGGGAATGACTCAGACTGTTTTTCTTAGGGAGGCGTATATGAAAGGGAGTTTGGTTGAGCCTAATCCGTTATATACTGCTCGCAGGAATATGTTGGAACTTGTGTTGTTGGGGCAGAGGAAAACTAAACAACTGCTGGATTGTGATGAATTAAAGGAAGGGAGCAAGAGTGTAGTGTGTGATGTGGATGAGGGAGGTAAAAGACAAGGAGATTGGGTGATTCCATTCTTGGAGAGTTGTGAGGAGAATAGATCGTTGTGA 1305 0.4904 MNLFPIFRNRTFPSPTTSPTSNNNPFTPFFLLFQRRWKKPTVSAQTRLEDRVRDPHLDKLMSHVAKLKLILGTRHLMSTRKRGPFVSLQLMSRWRNVLGLNVPVAQFLNKYPHVFRVFIHPFRRNPCCRLTKKMEELIALEEVVVVEQEVEAVKRVKKLLLMSVNGTLRVHALRMIRRELGLPDDFRDSILGKYSGDFRLVDLEVVELVHKDCDCDDDKLGVAEVEKWREREYNEKWLSEFETKFAFPISFPTGFKIERGFRDKLRNWQRLPYTKPYERREAAVRVRTCGGIDRYEKRAVAVLHELLSLTVEKMVEVDQLVHFRRDLAVEVNLRELILKHPGIFYISTKGMTQTVFLREAYMKGSLVEPNPLYTARRNMLELVLLGQRKTKQLLDCDELKEGSKSVVCDVDEGGKRQGDWVIPFLESCEENRSL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2104 434 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 18 431 - -
Dod01g2104 434 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 18 431 IPR045040 GO:0003723
Dod01g2104 434 Pfam Plant organelle RNA recognition domain 52 387 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2104 Dod-Chr1 57520216 57524235 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2104 - - gmx:100789857 630.557