Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2100 ATGATTTTGAAACTGAACACGCTGGAGGCTTTTGTGAGTGAGTATGCTCTAATAGGAGATAACGAAGCCAAGCTTGGAATCCTTCTGGGAGCTGTGTCTGAGGCTGGATTCCTTAATGGATTAGAAAGAAACAGGTTTATGGAACACCTAGCTATTGGGTGCAGCATATGTTTAGGGAGTCAACTGGAGCAACATATCTTAAAGATAAAGGCTGCGAACTTGGGGAGTAACCAAGAGAACCTAAAGATTTCTCTTACGGGATATACTGCCTCTTCAACTGGGTCAACACAGACTGTACTCACATCCGCCAATGCATTGGATGAGAATACGTTTGCTGAACCACAAAAGATATCACCAAAGCAAAGTCCATTAAAGGGAGCTGGCAATGAGATGAATGTCATACTCCCTCCAGTTTCGTTGACAGTGTTTGATCTCTAG 438 0.4315 MILKLNTLEAFVSEYALIGDNEAKLGILLGAVSEAGFLNGLERNRFMEHLAIGCSICLGSQLEQHILKIKAANLGSNQENLKISLTGYTASSTGSTQTVLTSANALDENTFAEPQKISPKQSPLKGAGNEMNVILPPVSLTVFDL* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2100 145 Pfam Alpha-L-arabinofuranosidase C-terminal domain 62 139 IPR010720 GO:0046373|GO:0046556
Dod01g2100 145 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 54 145 - -
Dod01g2100 145 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 6 51 - -
Dod01g2100 145 SUPERFAMILY Glycosyl hydrolase domain 65 144 - -
Dod01g2100 145 Gene3D - 58 145 IPR013780 -
Dod01g2100 145 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 54 145 - -
Dod01g2100 145 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 6 51 - -
Dod01g2100 145 SMART alpha_l_af_c 13 139 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2100 Dod-Chr1 57490874 57492915 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2100 67 145 Glycoside Hydrolase AT3G10740 45.122 2.07e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2100 K01209 - gmx:100780771 102.834