Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2083 ATGGCAGATCAACTCACCGACGAACAGATCTCTGAGTTCAAGGAAGCCTTCAGCTTGTTCGATAAGGATGGCGATGGTTGCATCACAACCAAGGAGCTTGGAACTGTTATGCGGTCATTGGGGCAGAACCCAACCGAGGCAGAGCTCCAGGACATGATCAATGAAGTCGATGCTGATGGCAACGGCACCATTGACTTCCCCGAGTTTCTAAACCTTATGGCCAGGAAAATGAAGGACACTGATTCTGAGGAGGAGCTGAAGGAGGCGTTCCGAGTCTTCGACAAGGATCAGAACGGGTTCATTTCTGCCGCTGAGCTCCGCCATGTGATGACTAACCTTGGGGAGAAGCTCACTGATGAAGAAGTTGATGAGATGATCCGAGAGGCTGATGTCGATGGTGATGGCCAAATAAATTATGAGGAGTTTGTTAGGGTGATGATGGCCAAGTGA 450 0.4978 MADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVRVMMAK* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2083 149 Pfam EF-hand domain pair 83 146 IPR002048 GO:0005509
Dod01g2083 149 Pfam EF-hand domain pair 12 73 IPR002048 GO:0005509
Dod01g2083 149 ProSitePatterns EF-hand calcium-binding domain. 94 106 IPR018247 -
Dod01g2083 149 ProSiteProfiles EF-hand calcium-binding domain profile. 81 116 IPR002048 GO:0005509
Dod01g2083 149 ProSitePatterns EF-hand calcium-binding domain. 21 33 IPR018247 -
Dod01g2083 149 ProSiteProfiles EF-hand calcium-binding domain profile. 117 149 IPR002048 GO:0005509
Dod01g2083 149 ProSiteProfiles EF-hand calcium-binding domain profile. 8 43 IPR002048 GO:0005509
Dod01g2083 149 ProSiteProfiles EF-hand calcium-binding domain profile. 44 79 IPR002048 GO:0005509
Dod01g2083 149 ProSitePatterns EF-hand calcium-binding domain. 57 69 IPR018247 -
Dod01g2083 149 ProSitePatterns EF-hand calcium-binding domain. 130 142 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2083 Dod-Chr1 57283428 57285420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2083 12 78 EF-hand Containing Proteins AT2G27030 46.269 1.18e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2083 K02183 - sspl:121751895 297.745