Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2082 ATGTTTCTCCTCAAGAGGTTGTGCATGCTTGTTCTGCTTCTTATTTCAGTGTTGGGTTTCCTTGCTGTTGCTGATGTGGATTCCAATAAAACCTCTATACTAGAGGTAGATGGTTCCAAGAGTTCTGGAAGGCGGATTCCAGACACGTTTTTTGGAGCATTCTTTGAAGAAATCAATCATGCTGGTGCAGGAGGACTGTGGGCAGAACTTGTTAGAAATAGAGGTTTTGAAGCTGGAGGCCCAAATGTTCCTTCAAATATTTATCCTTGGACAATTATTGGAGATGAATCATCCATCCTTGTATCAACGGATCGTTCCTCTTGCTTTGAACGAAATAAGGTTGCATTACGTATGGATGTGCTTTGCCATGGAACCAAATCATGTCCACCTAATGGCGTTGGAATCTCTAACCCTGGATATTGGGGCATGAATATTGAGAAAGGGAAGAAGTATAAAGTGGTCTTCTATGTCAAAGCGATTGGACCGATTGATCTAAAGGTTTCGCTTGCGGGGTCTGATGATGGTGGTTGTTATGTTGAGGGGGATTATCTAAGGAATGCATTTCGCTGGAAAGACACTGTTGGACCATGGGAAGAGAGACCTGGTCACTTTGGTGATATCTGGGATTACTGGACTGATGATGGTTTAGGTTATTTTGAGGCTCTCCAACTAGCAGAGGACCTCGGTGCATTGCCGGTTTGGGTATTTAACAATGGTATCAGCCATCATGATGAGGTTAATACATCTGCGATTCAACCTTTTGTGCAAGAAGCCCTAGATGGCATCGAGTTTGCAAGAGGTTCTCCCAAATCAACATGGGGCTCACTTAGAGCTTCCATGGGGCATCCTAAGCCATTTGACTTGAGGTTTGTTGCTGTTGGAAATGAAGACTGTGATAAGTTTAACTATCAAGGAAACTACCTCAAGTTCTATGCTGCCATAAAACGTGCTTATCCAGATATTCAAATTATCTCAAACTGTGATGGATCTGAAAAGCCGTTAAATCAGCCTGCGGATCTCTATGATTTCCATATTTATACCAATTCTAAAGACATGTTTGCCAAGTCTACCAAGTTCGATAACACATCACGAACAGGGCCAAAGGTGTTTGTTAGTGAGTATGCTGTTTGGCAACAAGATGCCGGAAATGGAACCCTTTTGTCTGCAGTAGCTGAGGCTGCATTTCTAATTGGTTTGGAAAGGAACAGTGATATTGTGCAGATGGTCAGCTATGCACCACTTTTTGTAAACACAAATAATAGAATGTGGACCCCAGATGCAATTGTATTTGACTCTCATCAACATTATGGAACTCCTAGTTATTGGCTTCAACGTATATTCACTGAGTCGAGTGGTGCAAGTTTACTCAATTCGACGCTTAAAACCTCTTCTGTTTCAATCGTGGCTTCTGCAGTTGAATTTAAAAGCTCTGAAGATCAGAAGAATTACATAAGAATAAAGGCAGTGAATTTTGGAAGTGACACTGAGAATCTCAGGATTTCTATAAATGGATTGAGTTCAAATGTACAACAATCTGGATCAAGAAAGATTGTGCTCACAGCATCTAATGTAATGGATGAGAATTCCTACTCTGAGCCAAAAAAGATTGTGCCGCAGCAAAGTTTACTTGAGAATGCAAACAAGGATATGGATGTCATACTTCCTCCTCATTCAGTTACAGCATTTGATCTTTTGAGATAG 1701 0.4115 MFLLKRLCMLVLLLISVLGFLAVADVDSNKTSILEVDGSKSSGRRIPDTFFGAFFEEINHAGAGGLWAELVRNRGFEAGGPNVPSNIYPWTIIGDESSILVSTDRSSCFERNKVALRMDVLCHGTKSCPPNGVGISNPGYWGMNIEKGKKYKVVFYVKAIGPIDLKVSLAGSDDGGCYVEGDYLRNAFRWKDTVGPWEERPGHFGDIWDYWTDDGLGYFEALQLAEDLGALPVWVFNNGISHHDEVNTSAIQPFVQEALDGIEFARGSPKSTWGSLRASMGHPKPFDLRFVAVGNEDCDKFNYQGNYLKFYAAIKRAYPDIQIISNCDGSEKPLNQPADLYDFHIYTNSKDMFAKSTKFDNTSRTGPKVFVSEYAVWQQDAGNGTLLSAVAEAAFLIGLERNSDIVQMVSYAPLFVNTNNRMWTPDAIVFDSHQHYGTPSYWLQRIFTESSGASLLNSTLKTSSVSIVASAVEFKSSEDQKNYIRIKAVNFGSDTENLRISINGLSSNVQQSGSRKIVLTASNVMDENSYSEPKKIVPQQSLLENANKDMDVILPPHSVTAFDLLR* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2082 566 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 174 565 - -
Dod01g2082 566 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 174 565 - -
Dod01g2082 566 SMART alpha_l_af_c 372 558 IPR010720 GO:0046373|GO:0046556
Dod01g2082 566 Pfam Alpha-L-arabinofuranosidase C-terminal domain 373 558 IPR010720 GO:0046373|GO:0046556
Dod01g2082 566 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 23 175 - -
Dod01g2082 566 Gene3D Glycosidases 174 448 - -
Dod01g2082 566 SUPERFAMILY (Trans)glycosidases 175 455 IPR017853 -
Dod01g2082 566 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 23 175 - -
Dod01g2082 566 Gene3D - 449 564 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2082 Dod-Chr1 57241837 57258054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2082 175 566 Glycoside Hydrolase AT3G10740 67.430 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2082 K01209 - gmx:100812703 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2082 01 57241837 57258054 Dod01g2082 01 57241837 57258054 ECH