Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2066 ATGAATGCAGTTCTCTACTGCAGGAGGGTGAATTCCACAGGCTGGCTGATTCCACAATACATAGCATACAAGAGAAACATGAGGTTGTTTAATAAATGTGCAATTGTGATAAAACTATGCCCAGAGTCAAATGGGTTTCATTGGAAAATAGACTATGGAGACGATGTTGAAGTTGATGGATTCGACATAGACTATGGGAATGATGTTTTGACTGTAAAACATGGCGATATGGGTACCTATGTACTAAACAAACAAACACCAAATAGGCAACTCTGGCTGTCTTCTCCAGTAAGTAGTCCCTCAAGGTTTGATTGGGATCAGGATAATAAAGCGTGGATTTATAGACGGACCAAAGCAAACATGTACAAAATTTTAGAAGCTGAGCTGGAGCAACTGTGGGGCAAACCTATTGTACTTTCCTAA 423 0.3995 MNAVLYCRRVNSTGWLIPQYIAYKRNMRLFNKCAIVIKLCPESNGFHWKIDYGDDVEVDGFDIDYGNDVLTVKHGDMGTYVLNKQTPNRQLWLSSPVSSPSRFDWDQDNKAWIYRRTKANMYKILEAELEQLWGKPIVLS* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2066 140 Gene3D Frataxin/CyaY 48 140 IPR036524 GO:0008199|GO:0016226
Dod01g2066 140 PANTHER FRATAXIN 51 138 IPR002908 GO:0008199|GO:0016226
Dod01g2066 140 SUPERFAMILY Frataxin/Nqo15-like 52 137 IPR036524 GO:0008199|GO:0016226
Dod01g2066 140 SMART Frataxin_Cyay_2 53 140 IPR002908 GO:0008199|GO:0016226
Dod01g2066 140 ProSitePatterns Frataxin family signature. 81 95 IPR020895 -
Dod01g2066 140 ProSiteProfiles Frataxin family profile. 1 137 IPR002908 GO:0008199|GO:0016226
Dod01g2066 140 Pfam Frataxin-like domain 54 135 IPR002908 GO:0008199|GO:0016226
Dod01g2066 140 TIGRFAM FeS_CyaY: iron donor protein CyaY 60 138 IPR002908 GO:0008199|GO:0016226
Dod01g2066 140 TIGRFAM mito_frataxin: frataxin 55 130 IPR017789 GO:0004322|GO:0005739
Dod01g2066 140 PRINTS Frataxin signature 82 97 IPR002908 GO:0008199|GO:0016226
Dod01g2066 140 PRINTS Frataxin signature 67 82 IPR002908 GO:0008199|GO:0016226
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2066 Dod-Chr1 56820383 56822678 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2066 K19054 - gmx:100811801 169.474