Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2056 ATGGAATCGAGCATTCTAGAATCCATCGGCGTGGAGATCATCGGAGTGATGTCCCCAGTCTCCATCTGCATGTTCCTCGTCGTCCTCCTCGTTTACTCCCTCTCCGCCCCCTCCTCCTCCTCCTCCGCCGGCGCCAACATGCGCACCGCCGCCAACCTCGTCTACGCCGAGAGCCCCTCCGACACCGCCGCGCAGAAGCTGGAGGGCGCACTCCTCAACGCCCTCGTCTTCGTCATCCTCATCGCCCTCGTCACCTTCCTCCTCCTCCTCCTCTACTACTACAACTGCACCTCCTTCCTCAAACACTACACCCGCTTCAGCGCCTTCTTCGTCCTCGCCTCCATGGGCGGGTCCATCTTCCTCTCTCTCATCCAGCGCTTCTCCATCCCTCTCGATTCCGTCACGTGCCTAATCCTCCTCTTTAATTTCACCGTCGTTGGGGTCCTCTCCGTCTTCGGCAACGGGATCCCGATCCTCGTCCGGCAAGGGTACATGGTCTGTTTGGGGATCAGCGTTGCCGCGTGGTTGACCAAGCTGCCCGAGTGGACCACGTGGGTGCTTCTGGTTGCCCTGGCGGTTTATGACCTTGTGGCGGTTTTGGCACCCGGCGGGCCGTTGAAGATGTTGGTGGAATTGGCGTCGAGCCGGAACGAGGAGCTTCCGGCATTGGTTTATGAGGCCCGGCCCACTGTTTCTCGGCCCGGGCCTCGTGGTGGTACTACTTTGGGCCTATTGGTGGCCGGGGTTGCGGCAGGGGAGCCTTCGTTGGCGTCGGCGGCGGCAATTGAGCTTCAGGGGATGTCTGGGGACAATGTGGAGAGGAGTGGGATTGGGAATTTCAATGATGATTCGAATTTGAATGAGTACTCTGTTGTGGCAATGGGGGGTTTTGGGGGTGAGAGGGGTCGTGATGAGGAAGAGGAGAGGTCACCATTGGTGGGTAGAGAGGGTGAGATTGTTGATGAGGAGATGTCTAGAGTTGAAGGGAATGGGAATGTGAGGAGGGATGATGGTGGTGGTGATGTGGAGGTTGCTGAAAGGGGTATTAAGCTTGGGCTTGGAGATTTTGTTTTCTACAGTGTTCTTGTTGGTAGGGCTGCAATGTATGATCTCATGACAGTGTATGCTTGTTACCTTGCAATTATATCCGGACTGGGTTGCACCCTTATCTTGTTGTCGGTGTGCCGCCAAGCTCTGCCAGCCCTGCCGATTTCTATCATATTGGGTGTTCTTTTCTATTTCTTGACCAGATTGCTGATGGAACCCTTCATTGTTGGGACAGCCACGAATTTGATGATGTTTTGA 1305 0.5586 MESSILESIGVEIIGVMSPVSICMFLVVLLVYSLSAPSSSSSAGANMRTAANLVYAESPSDTAAQKLEGALLNALVFVILIALVTFLLLLLYYYNCTSFLKHYTRFSAFFVLASMGGSIFLSLIQRFSIPLDSVTCLILLFNFTVVGVLSVFGNGIPILVRQGYMVCLGISVAAWLTKLPEWTTWVLLVALAVYDLVAVLAPGGPLKMLVELASSRNEELPALVYEARPTVSRPGPRGGTTLGLLVAGVAAGEPSLASAAAIELQGMSGDNVERSGIGNFNDDSNLNEYSVVAMGGFGGERGRDEEEERSPLVGREGEIVDEEMSRVEGNGNVRRDDGGGDVEVAERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRQALPALPISIILGVLFYFLTRLLMEPFIVGTATNLMMF* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2056 434 Gene3D Presenilin 331 425 IPR042524 -
Dod01g2056 434 PANTHER PRESENILIN 1 434 - -
Dod01g2056 434 PANTHER PRESENILIN 1 434 IPR001108 GO:0004190|GO:0016021|GO:0016485
Dod01g2056 434 SMART psh_8 68 420 IPR006639 GO:0004190|GO:0016021
Dod01g2056 434 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016021|GO:0016485
Dod01g2056 434 PRINTS Presenilin family signature 178 185 IPR001108 GO:0004190|GO:0016021|GO:0016485
Dod01g2056 434 PRINTS Presenilin family signature 195 212 IPR001108 GO:0004190|GO:0016021|GO:0016485
Dod01g2056 434 Pfam Presenilin 10 424 IPR001108 GO:0004190|GO:0016021|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2056 Dod-Chr1 56707346 56709414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2056 1 434 Miscellaneous Gene Families AT1G08700 62.099 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2056 K04505 - tcc:18599765 495.738