Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2055 ATGTGTAGGGTGATACAAGCTCTTACCCTTTGGCTTGTTATATGTGTGGGTTTATGTTCCATTACACAGTCATTAGGTGGTACTTCAAGATCAAGAGAGTGCCAGTTCCCAGCAATATTCAACTTTGGGGACTCAAATTCAGACACAGGAGGCCTTTCTGCGGCCTTTGGACAAGCTGGCTTCCCTGCTGGAATCACATTCTTCCATCACCCTGCTGGCCGCTACTCTGATGGCCGTCTTATTATTGATTTTATAGGTGCCTGGTCTCAAAATTTTCGCAACAAAGGTGGAATATATAGAACATTGTTACCAAAAGCAGAATATTTTTCTCGCGCATTATACACCTTTGATATTGGTCAGAATGACTTGGCTGCTGGTTATTTCCACAACATGTCCACAGATCAAGTTAGAGCATATGTCCCTGATGTTTTGGCTCAATTCAAGAACACAGTCAAGTATGTATATGGTCAAGGAGGAAGGTCATTCTGGATTCACAACACTGGACCGCTTGGTTGTTTGCCATACATGTTGAGTCTCCAACAAGCGAAAAATGGTCCTATGGACAATGTAGGATGTTCAATTCCTCACAATGAAGTGGTCCGGTTCTTCAACCGTAAATTGAAAGAAGTTGTGGTTCAACTCAGAAAAGAGCTTTCCTTGGCTGCCATCACCTATGTTGATCTTTACTCAGTGAAGTACTCCCTCATTGCTCAAGCAAAGAAGAATGGTTTTCAGGAGGCAATTAGTGCTTGTTGTGGGCATCACGGTCGGAAATACAACTATGACATGCAAGTTGGATGTGGAAGTATGGCTCTGGTCGATGGGAAAATGGTCATGGTGGGAAAGCCATGCAAGGATCCATCGGTTTGGGTTAATTGGGATGGTGTTCACTACACTGAGGCTGCTAACAAATGGGTGTTTGATAAAATCGTTGATGGTTCATTTTCTGACCCACCAATTCCCTTGAAGATGGCTTACACAGGAGGCCTTTCTGCTGCCTTTGGACAAGCTGGCTTCCCTGCTGGAATCACATTCTTCCATCACCCTGCTGGCCGCTACTCTGATGGCCGCCTTATTGTTGATTTCATAGCTAAGAAGCTGGGCTTGCCATATTTGAGTGCATACCTTGATTCGGTTGGGTCAAATTTTGGTCATGGAGCCAACTTTGCAACTGCTGGATCCACCATTAGACCACAGAATACAACCCTTCATCAGACTGGTGGCTTCAGCCCTTTCTCTTTGGATGTTCAATTCACTCAGTTCAATGATTTTCATCGCAGGTCCCAACTCTTCCGTGGTAAAGGTGGAGTATATGAGACATTGTTACCAAAAGCAGAATATTTTTCTCGCGCATTATACACCTTTGATATTGGTCAGAATGACCTGACGTCTGGTTACTTCCACAACATGTCCACGGATCAAGTTAGAGCATACGTCCCTGATGTTTTGGCTCAATTCAAGAACGTAGTCAAGTCAGCATATGAAACACAACATTTACATTCAGTGATCTGTTGGCATTGCTAG 1524 0.439 MCRVIQALTLWLVICVGLCSITQSLGGTSRSRECQFPAIFNFGDSNSDTGGLSAAFGQAGFPAGITFFHHPAGRYSDGRLIIDFIGAWSQNFRNKGGIYRTLLPKAEYFSRALYTFDIGQNDLAAGYFHNMSTDQVRAYVPDVLAQFKNTVKYVYGQGGRSFWIHNTGPLGCLPYMLSLQQAKNGPMDNVGCSIPHNEVVRFFNRKLKEVVVQLRKELSLAAITYVDLYSVKYSLIAQAKKNGFQEAISACCGHHGRKYNYDMQVGCGSMALVDGKMVMVGKPCKDPSVWVNWDGVHYTEAANKWVFDKIVDGSFSDPPIPLKMAYTGGLSAAFGQAGFPAGITFFHHPAGRYSDGRLIVDFIAKKLGLPYLSAYLDSVGSNFGHGANFATAGSTIRPQNTTLHQTGGFSPFSLDVQFTQFNDFHRRSQLFRGKGGVYETLLPKAEYFSRALYTFDIGQNDLTSGYFHNMSTDQVRAYVPDVLAQFKNVVKSAYETQHLHSVICWHC* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2055 507 PANTHER BNAA06G32900D PROTEIN 34 86 - -
Dod01g2055 507 PANTHER BNAA06G32900D PROTEIN 98 326 - -
Dod01g2055 507 CDD SGNH_plant_lipase_like 37 314 IPR035669 -
Dod01g2055 507 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 34 86 - -
Dod01g2055 507 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 98 326 - -
Dod01g2055 507 Gene3D SGNH hydrolase 27 314 IPR036514 -
Dod01g2055 507 Gene3D SGNH hydrolase 324 501 IPR036514 -
Dod01g2055 507 Pfam GDSL-like Lipase/Acylhydrolase 333 494 IPR001087 GO:0016788
Dod01g2055 507 Pfam GDSL-like Lipase/Acylhydrolase 39 310 IPR001087 GO:0016788
Dod01g2055 507 PANTHER BNAA06G32900D PROTEIN 327 493 - -
Dod01g2055 507 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 327 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2055 Dod-Chr1 56685185 56702151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2055 347 486 Acyl Lipid Metabolism Gene Families AT4G10950 30.769 3.13e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2055 - - spen:107019256 560.451