Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2050 ATGGGGAACGAGCTGAACGAGAATCTTTTGCAGCAGAAGCAAACCAATTCAAAGGAAGAGTCACTGAGAAAGAGGGTATGGGAAGAAAGCAAGAAGATGTGGGTTGTAGCAGGCCCTGCCATTATCACAAGGTTTTCAACCTTTGGAATAACTGTAGTTAGTCAAGCCTTCATCGGCCATATTGGCTCCGCTGAACTTGCTGCCTATGCCATTGTCATGACTTTCCTAGTCAAGTTTGCAAATGGTGTACTGCTAGGTATGGCAAGTGCATTGGAAACTCTATGTGGACAAGCATATGGGGCCAAGAAGTATGATATGCTTGGAGTGTATCTTCAAAGATCTTGGGTAGTCTTGTTCTTGGCCTCATTATTTCTTCTCCCCATTTACATCTTTACCACCCCACTTTTAGAGGCTCTAGGCCAAGAAAAGAGTATTGCTCAAGTTGCTGGAAGCATTTCTCTATGGTCAATAGGAGTGGTCTTTGCCTTCTCTGTGTCATTCACCTGCCAAATGTTCCTACAAGCACAGAGCAAGAACAAGATTATTGCTTACCTAGCAGCAGTTTCAATTTCAACTCATCTTTTTCTGTCATGGCTGTTGACTGTGAAGTACAAGTTTGGGCTCAATGGTGCAATGACATCAACACTTTTGTCATACTGGATACCCAATTTGGGCCAGCTTGTGTTTATCATGACTAAATGCCCTGACACATGGAAAGGCTTCTCATTTTTGGCATTCAAAGATCTCTGGCCTGTTATCAAGCTTTCCCTATCTTCTGGAGTTATGTTGTGTCTTGAGATCTGGTACAATGCAGTGTTAATTCTTCTAACAGGAAACTTGGATAATGCTGAGGTTTACATTGATGCACTAGCCATATGCCTCAACCTCAACGGGTGGGAATTGATGATAGCCCTTGGTTTCTTTGCTGCAGCTGGTGTGAGGGTGGCAAATGAGCTTGGAAGAGGGAGTGCAAAGACTGCAAAATTTTCCATTCTAGTGACAGTTCTCACATCATTTTGCATTGGGTTCGGGCTATTCCTGGTATTCCTATTCCTGAGAGGAAGACTTGCTTATATTTTCACTCCAAACCCAGAGGTAGCTGAAGCAGTTGGGGATTTATCACCATTACTCTCATTCTCTATGTTGTTGAACAGTGTCCAACCTGTACTCTCTGGTGTTTCTGTTGGAGCTGGATGGCAAAGCGTTGTAGCATACGTAAACATAGGCAGTTATTACCTAATTGGTGTTCCTGTTGGAGTGGTGCTCGGTAACATTCTCCATTTGCAAGTCAAGGGTATTTGGATTGGAATGTTGTTTGGAACATTTGTTCAAACTGTAATGCTTATTGTAATCACACTCAAAACCGATTGGGACAAGCAGGTAGAGATAACTCGAAATCGTTTAAACAAATGGGCTGTGGTGGAGAATGAAGAGCCAAGCAACAACTAG 1449 0.4293 MGNELNENLLQQKQTNSKEESLRKRVWEESKKMWVVAGPAIITRFSTFGITVVSQAFIGHIGSAELAAYAIVMTFLVKFANGVLLGMASALETLCGQAYGAKKYDMLGVYLQRSWVVLFLASLFLLPIYIFTTPLLEALGQEKSIAQVAGSISLWSIGVVFAFSVSFTCQMFLQAQSKNKIIAYLAAVSISTHLFLSWLLTVKYKFGLNGAMTSTLLSYWIPNLGQLVFIMTKCPDTWKGFSFLAFKDLWPVIKLSLSSGVMLCLEIWYNAVLILLTGNLDNAEVYIDALAICLNLNGWELMIALGFFAAAGVRVANELGRGSAKTAKFSILVTVLTSFCIGFGLFLVFLFLRGRLAYIFTPNPEVAEAVGDLSPLLSFSMLLNSVQPVLSGVSVGAGWQSVVAYVNIGSYYLIGVPVGVVLGNILHLQVKGIWIGMLFGTFVQTVMLIVITLKTDWDKQVEITRNRLNKWAVVENEEPSNN* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2050 482 TIGRFAM matE: MATE efflux family protein 39 434 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod01g2050 482 Pfam MatE 39 199 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod01g2050 482 Pfam MatE 261 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod01g2050 482 CDD MATE_eukaryotic 29 462 IPR045069 GO:0042910|GO:1990961
Dod01g2050 482 PANTHER MULTIDRUG RESISTANCE PROTEIN 14 471 - -
Dod01g2050 482 PANTHER PROTEIN DETOXIFICATION 14 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2050 Dod-Chr1 56600346 56610670 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2050 K03327 - gmx:100775619 801.201