Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2049 ATGGAGGAGGATCTGAGGCAGAAGCTGCTGAGGGAAACTTCATCAGAGGAACAAGAAGAGGAAGAGGGGTTGTCACTGGCGAGGAGGGTGTGGGAAGAGAGTAGGCTGATGTGGATTGTTGCGGCTCCAGCCATATTCACAAGGGCTTCCACTTTTGGGGTCCAAGTTATAAGCCAAGCATTTGTTGGACATCTTGGGTCTAGGGAACTCGCTGGTTTTGCTCTTGTCTTCACCGTACTCATAAGATTCGCCAATGGTATTCTGCTAGGAATGGCCAGTGCGTTGTCAACACTTTGTGGACAAGCATATGGTGCAAAGGAATATGGCATGATGGGAGTATACCTCCAAAGATCATGGATAGTTTTGTTCGTCACTGCAGTCCTCCTTGTTCCGGTGTTCGTTTTCACAACCCCAATTTTGACCCTCTTAGGCCAAAATGAAAGCATAGCACAGGTTTCAGGAACCATCTCTCTCTGGTCGATTCCTATCGTGTTTGCTTTCATCGTCTCCTTCACTACCCAGACCTTCCTGCAATCTCAAAGCAGGAATGTGATCATTGCATTCTTGGCAGCGTTTTCGTTACTCGTTCACGTGTTCCTCTCTTGGCTTCTGACTAGGAAATTCGAGTTTGGAATTGCCGGTGCGATGATTTCCACCAGTTTGGCATATTGGATTCCCAACATTGGCCAGCTTATATTCATCACATGTGGTTGGTGCTCAGATACATGGAAAGGCTTGTCATTTTTAGCATTCAGAGACCTCTGGCCTGTTGTGAAGCTTTCCCTTTCATCTGGTACCATGTTGTGTCTTGAGTTGTGGTACAACACAATATTGGTCCTTTTGACTGGTAACATGAAGAATGCAGAAGTTGAAATTGATGCTTTATCGATATGCCTCAACATCAATGGGTGGGAAATGATGATATCACTTGGTTTCATGGCTGCAGCAAGTGTTCGAGTGGCAAATGAGCTTGGAAAAGGAAGCGCAAAAGCTGCCAGGTTCTCTATCTTGGTGGCAGTACTTACATCATTGAGCATTGGGTTCCTTCTGTTTCTATTTTTCATATTCTTTAGGGGGAGACTTGCATATGTATTTACCTCAAATAAGGCTGTGGCCGCTGCAGTTGGGGATTTGTCACCTCTGTTATCAATCTCTATACTATTAAACAGTGTTCAGCCTGTACTCTCAGGTGTTGCTATTGGAGCTGGATGGCAAAGCATTGTAGCATATGTCAACATAGCATGCTATTACGCCATAGGAATTCCTGTAGGAGTTGTGCTTGGCCATGTCCTTAATTTGCAAGTCAAGGTACCCTGTTACGTAATCTCTTTTAATTTTTGCTCTCTTGTTTTCACTTTGCCATTTCAACTTTGGCTGCTTAATCAATTTCACAAATCTCTTTCTTCTTCTTTAGGGAATCTGGATTGGCATGTTGTTTGGGACGTTGATTCAAACTATAGTGCTGACTATAATCACTTACAAAACTAA 1488 0.4382 MEEDLRQKLLRETSSEEQEEEEGLSLARRVWEESRLMWIVAAPAIFTRASTFGVQVISQAFVGHLGSRELAGFALVFTVLIRFANGILLGMASALSTLCGQAYGAKEYGMMGVYLQRSWIVLFVTAVLLVPVFVFTTPILTLLGQNESIAQVSGTISLWSIPIVFAFIVSFTTQTFLQSQSRNVIIAFLAAFSLLVHVFLSWLLTRKFEFGIAGAMISTSLAYWIPNIGQLIFITCGWCSDTWKGLSFLAFRDLWPVVKLSLSSGTMLCLELWYNTILVLLTGNMKNAEVEIDALSICLNINGWEMMISLGFMAAASVRVANELGKGSAKAARFSILVAVLTSLSIGFLLFLFFIFFRGRLAYVFTSNKAVAAAVGDLSPLLSISILLNSVQPVLSGVAIGAGWQSIVAYVNIACYYAIGIPVGVVLGHVLNLQVKVPCYVISFNFCSLVFTLPFQLWLLNQFHKSLSSSLGNLDWHVVWDVDSNYSADYNHLQN* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2049 495 Pfam MatE 43 203 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod01g2049 495 Pfam MatE 267 425 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod01g2049 495 PANTHER MULTIDRUG RESISTANCE PROTEIN 15 452 - -
Dod01g2049 495 PANTHER PROTEIN DETOXIFICATION 15 452 - -
Dod01g2049 495 MobiDBLite consensus disorder prediction 1 20 - -
Dod01g2049 495 CDD MATE_eukaryotic 33 436 IPR045069 GO:0042910|GO:1990961
Dod01g2049 495 TIGRFAM matE: MATE efflux family protein 43 434 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2049 Dod-Chr1 56557231 56562400 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2049 K03327 - gmx:100792122 715.301