Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2024 ATGAGGCCTTCAATGAACTACTCCTTCAATGTCAATGTTCCCAAAGCCAGCAACAACAACAACAAATCATATCCAGTTACTTTTGCATACTTGATCTCTGCATCAAGAGGAGATGTTGTGAAGCTCAAGAGATTGCTGAAGGTGCTGTATCATCCAGGGAACTACTATTTGGTTCATTTGGATTATGGGGCATCACAGGTGGAGCATAGGGAAGTGGCAGAATATGTGGCTAATGATCCTGTGTTTGGTCAAGTTGGGAATGTTTGGGTTGTGGGGAAGCCTAATTTGGTCACTTATAGAGGACCAACCATGCTCGCTACAACACTCCATGCCATGGCAATGCTTCTGAGGATCTGCCAATGGGATTGGTTTATTAATCTTAGTGCATCTGATTATCCCTTGGTAACACAAGATGGCCTTAAGAAATCAGAGATTTGGTGGGTCATTAAGCAAAGGAGTCTGCCGGCATCTTTTAAACTCTACACAGGTTCAGCTTGGACAATACTATCAAGATCATTTTCTGAGTACTGCATTGTGGGTTGGGAAAATTTGCCAAGGACCCTCCTCCTCTACTACACCAATTTTGTGTCATCCCCAGAAGGGTATTTCCAAACAGTTACATGCAACTCTAAGGACTACAAGAACACCACTGCTAACCATGACCTTCACTACATTACTTGGGACAACCCTCCAAAACAACATCCAAGGTCTCTAGGACTAAGAGATTATAGGAAAATGGTTCTAAGCAACCGTCCATTTGCCAGAAAATTCAAGAAAAATGATCCAGTCCTTGATAAAATTGATAGGGAGCTTCTAAAGAGGAATCATGGGCAATTTACTTTTGGGGGGTGGTGCTCATCACAGGGTGGAAAGCACAGAACATGCTCAGGTTTGAGACCAGAGAATTATGGTGTACTCAACCCTGGCCCAGGATCACGAAAGTTAAAGAGTTTGCTAACAAGACTTCTTTCTGATAGATTTTTTCACAAACAACAGTGCAAGTAA 1005 0.4249 MRPSMNYSFNVNVPKASNNNNKSYPVTFAYLISASRGDVVKLKRLLKVLYHPGNYYLVHLDYGASQVEHREVAEYVANDPVFGQVGNVWVVGKPNLVTYRGPTMLATTLHAMAMLLRICQWDWFINLSASDYPLVTQDGLKKSEIWWVIKQRSLPASFKLYTGSAWTILSRSFSEYCIVGWENLPRTLLLYYTNFVSSPEGYFQTVTCNSKDYKNTTANHDLHYITWDNPPKQHPRSLGLRDYRKMVLSNRPFARKFKKNDPVLDKIDRELLKRNHGQFTFGGWCSSQGGKHRTCSGLRPENYGVLNPGPGSRKLKSLLTRLLSDRFFHKQQCK* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2024 334 Pfam Core-2/I-Branching enzyme 28 140 IPR003406 GO:0016020|GO:0016757
Dod01g2024 334 Pfam Core-2/I-Branching enzyme 153 246 IPR003406 GO:0016020|GO:0016757
Dod01g2024 334 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 141 334 - -
Dod01g2024 334 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 13 140 - -
Dod01g2024 334 PANTHER GLYCOSYLTRANSFERASE 141 334 IPR044610 GO:0015020
Dod01g2024 334 PANTHER GLYCOSYLTRANSFERASE 13 140 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2024 Dod-Chr1 56088579 56092401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2024 28 334 Glycosyltransferase AT4G27480 50.575 1.23e-122 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2024 - - gmx:100812712 555.444