Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2013 ATGGGTTTTTGGGGTGGTTCAGAATCTCAAAGGGGTCCGTTGAGGTTTTTGACAAGGAGGAAGCAGGTTGATTCTGCAGGCACCAGTTCTCAGGGTCTCCTTGCCAAGGCCTTATCTGTTCCTCATCTCATTGCAGTTGGTGTTGGTTCAACAATTGGTGCTGGGGTGTATGTTCTGGTTGGAACAGTTGCTAGAGACACGGCTGGACCGGCCTTGAGCTTTTCTTTTCTGGTGGCTGGAATAGCAGCTGGTCTTTCTGCCTTCTGCTACGCAGAGCTTGCTAGTCGCTGCCCTTCTGCTGGGAGTGCATATCACTATTCATACATATGTCTTGGGGAAGGTGTTGCTTGGCTGATTGGCTGGGCCTTGATACTGGAATATACAATTGGTAGCTCTGCTGTTGCACGCGGCATATCCCCCAATTTGGCTCCACTTTTTGGAGGTGCGGACCATTTGCCAATCTTTTTAGCACGCCAACATATTCCTTGGAATGATATTGTTGTGGATCCATGCGCAGCAATTTTGGTATTAATTATTACCGCACTCCTGTGTGGGGGGATCAAGGAGAGTACAGTAGTACAAGGCATAGTCACATCAGTGAATGTATGTGCTTTGCTTTTTGTCATAGCTGCTGGTGGTTACTTGGGATTCAAGTCTGGATGGGTTGGATATAAACTTCCTACGGGGTATTTTCCTTTCGGGGTTGATGGGATGCTTGCCGGTTCTGCAACAGTCTTTTTTGCATATATAGGCTTTGATGCTGTTGCCAGCACTGCTGAAGAGGTGAAAAATCCACAGAGAGATTTGCCCCTAGGTATTGGAGGCGCACTGTTTCTTTGTTGCGGATTGTACATGTTGGTCTCCATTGTTGTTGTTGGTTTAGTACCTTACTATGCAATTAATCCGGACACCCCCATTTCCTCTGCATTTGCTGATCATGGGATGCAATGGGCAGCTTATGTTATAAATGTTGGAGCTTGTATGGCTCTCTGCTCAACATTGATGGGTGGTATACTTCCTCAGCCACGAATCTTGATGGCTATGGCAAGGGATGGGCTGCTGCCACCATTTTTTTCTCACATAAATAAGCGCACTCAGGTTCCCATTAAGAGCACAGTAGCTACTGGCCTTTTTGCTGCAGTCTTGGCATTTCTTATGGACATCGATGAACTGGCAGGAATGGTTAGTGTGGGAACACTTTTAGCATTCACCATGGTGGCAGTATCTGTGTTAATACTAAGATATATTCCTCCAGATGAAGTCCCATTGTCTCCTTCTCTTCAGGACTCGATTGCTTCTGTGTCAATGCAGTACAGTTTGAGCAGTGCAAAGGCAAGGGCAAAAGTTGGTACTTCTGAGCACACGAAACCTTTAGTTGTCAAGGATGATGTTTCAATTGATCATCCCGTTACTTCTAATCATTTTGCCATAGGCAACTATATAAACAAGGATAATAGGAGAAAAGTTGCTGGATGGATCATAGCACTCACATGCTTGGGATCGTTTGTCCTCTCATATGCAGCTTCAGATTTATCTCTTCCTAGTTTTGTTCGCCTTCCATTGTGCGGAGTTGGCGGCATTCTTCTTTTATTGTGTCTTTTCTTCCTAACCTGGGTGGATCAAGATGATGCAAGGCACCACTTTGGGCACTCTGGAGGTTTCATTTGCCCGTTTGTGCCACTGCTGCCCATAGCTTGCATTCTTATCAATTCCTACTTACTCGTTAGTCTTGGATTGGGTACATGGTTGCGTGTTTTGGTATGGCTGGCAGCAGGGGCTCTAGTTTATGTATTTTATGGCAGAACTCATAGCTCTCTAAAAGATGCCATTTATGTGCCAGCAACTCAAGTGGAGGAAATCTATCAGACTTCCAGGAGCTATGTTGCTTAA 1890 0.455 MGFWGGSESQRGPLRFLTRRKQVDSAGTSSQGLLAKALSVPHLIAVGVGSTIGAGVYVLVGTVARDTAGPALSFSFLVAGIAAGLSAFCYAELASRCPSAGSAYHYSYICLGEGVAWLIGWALILEYTIGSSAVARGISPNLAPLFGGADHLPIFLARQHIPWNDIVVDPCAAILVLIITALLCGGIKESTVVQGIVTSVNVCALLFVIAAGGYLGFKSGWVGYKLPTGYFPFGVDGMLAGSATVFFAYIGFDAVASTAEEVKNPQRDLPLGIGGALFLCCGLYMLVSIVVVGLVPYYAINPDTPISSAFADHGMQWAAYVINVGACMALCSTLMGGILPQPRILMAMARDGLLPPFFSHINKRTQVPIKSTVATGLFAAVLAFLMDIDELAGMVSVGTLLAFTMVAVSVLILRYIPPDEVPLSPSLQDSIASVSMQYSLSSAKARAKVGTSEHTKPLVVKDDVSIDHPVTSNHFAIGNYINKDNRRKVAGWIIALTCLGSFVLSYAASDLSLPSFVRLPLCGVGGILLLLCLFFLTWVDQDDARHHFGHSGGFICPFVPLLPIACILINSYLLVSLGLGTWLRVLVWLAAGALVYVFYGRTHSSLKDAIYVPATQVEEIYQTSRSYVA* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2013 629 Pfam Amino acid permease 39 419 IPR002293 GO:0016020|GO:0022857|GO:0055085
Dod01g2013 629 Pfam C-terminus of AA_permease 554 604 IPR029485 -
Dod01g2013 629 Gene3D Amino acid/polyamine transporter I 35 436 - -
Dod01g2013 629 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 10 618 - -
Dod01g2013 629 PANTHER PROTEIN, PUTATIVE-RELATED 10 618 - -
Dod01g2013 629 PIRSF AA_transporter 475 618 - -
Dod01g2013 629 PIRSF AA_transporter 16 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2013 Dod-Chr1 55921543 55930026 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2013 12 624 Organic Solute Cotransporters AT5G36940 67.311 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2013 K13863 - gmx:100784895 949.888