Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2011 ATGATAGTGAAGGATGAAAATGGTGGTGGTGGTGTTGGAGGAAGATGGTCAAGGGGATTTGGAAGCTTGATTAGGAGGAAGCAAGTTGATTCAGTCCATTCAAGGGGACAACATGGTCATCATCAATTGGCTAGGAAGTTATCTGTTGTTGATCTCGTTGCTATTGGGGTTGGATCTACAATAGGAGCTGGAGTGTATATTCTCATTGGAACAGTTGCTAGAGAGCATGCAGGACCAGCACTTGTGATATCACTTCTCATTGCAGGAATAGCTGCTGCACTATCAGCTTTTTGCTATGCAGAGCTTGCATGTCGATGCCCATCTGCAGGGAGTGCTTATCATTATACATACATATGCATTGGAGAAGGGGTTGCTTGGTTGGTTGGTTGGGCCCTGATTCTAGAATATACAATTGGTGGTTCAGCTGTTGCTCGTGGCATAACCCCAAATCTGGCCTTATTTTTTGGTGGGGAGGACAACCTGCCATCATTTCTGGCTCGTCACTCCTTGCCAGGTCTTGGGGTGGTTGTTGATCCTTGTGCTGCTGTATTAGTTCTTCTTGTTACCTTACTCCTGTGCCTTGGAATCAAGGAGAGTTCAATGGCACAATCCATAGTGACAACGGTAAATGTCTGCGTCATGCTTTTTGTCATTATAGTTGGTGGATATCTAGGTTTCCAGTCTGGATGGGTTGGATATGAACTCCCCAGCGGGTATTTCCCATACGGAGTAAATGGGTTGTTTGCTGGGTCTGCAATAGTTTTCTTTTCATACATTGGTTTTGATGCAGTGACCAGCACAGCTGAGGAGGTTAAAGACCCTCAACGAGATTTGCCCCTTGGCATATCAACTGCTTTATGCATATGTTGCATCCTTTATATGCTTGTATCTGCAGTTGTTGTTGGTTTAGTGCCATATTATAGGTTGGACCCTGATACCCCAATCTCGTCTGTGTTTTCTAGCTATGGGATGGAATGGGCAGTGTATATAATAACAACTGGAGCCGTCACTGCTCTTTTTTCCAGTTTGTTGGGTTCAATTCTTCCTCAGCCACGAATCTTCATGGCAATGGCTAGGGATGGGTTGTTGCCCTCTTTCTTCTCAGACATCAATAAGCGCACACAAATTCCTTTGAAAAGCACTATTGTCACTGGTGTCTTTGCAGCTGCTCTTGCATTCTTCATGGATGTTTCCCAGTTAGCAGGGATGGTTAGTGTGGGAACATTGCTCGCATTTACCACTGTTGCAGTTTCAGTTTTGATAATCAGATATGTTCCACCAGATGAGATACCTATTCCATCTTCACTTCAAACAACTGTTGATCTGTTCGCAAGCCATTCTGGTAGTGATGTTGAGGAAGATAGGACTGTAAGTCCTGGAGATCCTGCTAGTTATTGTGAGAATCACCAACATGACAAGCCAGAGGCTCTGCTTGGACATCCTTTAATCATGAAAGGTGTAACCAAAGAAAAACAAAAAGAGAAAAGTAGGCGGAAACATGCTGCATGGACCATAGCCTTTCTATGTGTAGGGATTCTCATAGTTGCTGGTGCTGCTTCAGCTGATAGGTGCCCCAGCATTTTGCGCTTCACATTGTGCGGAATTGGTGGAATTCTTCTTTTGTGCAGTATTATTGTGCTGGCCTGCATAAAGCAAGATGACACAAGGCACAGCTTTGGTCACACAGGAGGTTTTGTTTGCCCATTTGTTCCATTCTTACCTGCTGCCTGCATTCTTATAAACACCTACTTGCTAATCGATCTTGGAATTGCCACATGGCTACGAGTTTCAGTGTGGTTGTTGATAGGAGTACTAATATACTTATTCTATGGCCGTGCGCACAGCTCTCTGCTAAACGCAATCTATGTTCCCTCAGCATGTGCCAATGAGATTCATCGTATTCAAGAATACCATCTAGCCTAG 1923 0.4425 MIVKDENGGGGVGGRWSRGFGSLIRRKQVDSVHSRGQHGHHQLARKLSVVDLVAIGVGSTIGAGVYILIGTVAREHAGPALVISLLIAGIAAALSAFCYAELACRCPSAGSAYHYTYICIGEGVAWLVGWALILEYTIGGSAVARGITPNLALFFGGEDNLPSFLARHSLPGLGVVVDPCAAVLVLLVTLLLCLGIKESSMAQSIVTTVNVCVMLFVIIVGGYLGFQSGWVGYELPSGYFPYGVNGLFAGSAIVFFSYIGFDAVTSTAEEVKDPQRDLPLGISTALCICCILYMLVSAVVVGLVPYYRLDPDTPISSVFSSYGMEWAVYIITTGAVTALFSSLLGSILPQPRIFMAMARDGLLPSFFSDINKRTQIPLKSTIVTGVFAAALAFFMDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPDEIPIPSSLQTTVDLFASHSGSDVEEDRTVSPGDPASYCENHQHDKPEALLGHPLIMKGVTKEKQKEKSRRKHAAWTIAFLCVGILIVAGAASADRCPSILRFTLCGIGGILLLCSIIVLACIKQDDTRHSFGHTGGFVCPFVPFLPAACILINTYLLIDLGIATWLRVSVWLLIGVLIYLFYGRAHSSLLNAIYVPSACANEIHRIQEYHLA* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2011 640 Pfam C-terminus of AA_permease 565 615 IPR029485 -
Dod01g2011 640 PANTHER CATIONIC AMINO ACID TRANSPORTER 4, VACUOLAR 17 633 - -
Dod01g2011 640 PIRSF AA_transporter 28 432 - -
Dod01g2011 640 PIRSF AA_transporter 490 622 - -
Dod01g2011 640 Gene3D Amino acid/polyamine transporter I 482 626 - -
Dod01g2011 640 Gene3D Amino acid/polyamine transporter I 42 442 - -
Dod01g2011 640 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 17 633 - -
Dod01g2011 640 Pfam Amino acid permease 47 429 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2011 Dod-Chr1 55875488 55882196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2011 20 640 Organic Solute Cotransporters AT3G03720 65.700 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2011 K13863 - gmx:100810218 1041.57