Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2009 ATGAACAACAACAACAACAACAACAACAGCAACATTCTGGCGTCGCGAACGAGCTCGCGGTCGGTGACGGAGACGGTGAACGGTTCGCACAAGTTCGTGATCAAAGGATACTCGCTGGCGAAGGGGATCGGAGTCGGGAAGCACATAGCGAGCGAGACTTTCAGCGTGGGAGGGTACCAGTGGGCGATATACTTCTACCCTGACGGCAAGAACCCGGAGGACAACTCCGCCTACGTCTCCGTCTTCATCGCACTCGCCAGTGATGGCACCGACGTCAGGGCGCTCTTCGAGCTCACCCTGCTCGACCAGAGCGGCAACGGCAAGCACAAGGTCCACAGCCACTTTGAACGCTCCCTCGAGAGCGGTCCCTACACTCTCAAGTACCGCGGCAGCATGTGGGGCTATAAGCGATTCTTCAAACGAGCTCAACTTGAAGCATCGACCTTCCTTAAGGATGACTGCTTGAAGATAAACTGCACAGTTGGTGTCGTGGTGTCATCCATCGATTGTTCAAAGTTGAACACAATACAAGTTCCTGATTCTGATATTGGAGCGCATTTTGGCATGCTGTTAGAGAACGAGGAAGGCTCTGATGTTACTTTCTCTGTAAATGGAGAAAGGTTTCATGCACATAAGCTTGTGCTGGCTGCTCGGTCCACCGCATTTGAAACGGAGTTTTTCAATCGGATGGAGGAAGATGATAATGAGATTGTTGTCACTGACATGGAACCCAAGGTTTTCAAGGCATTGCTTCATTTTATTTATAGAGACACTCTTATAGAAGATGATGAGCTCTTTATGTCACGGTCAACATTCTTGCCTTCAGTATCTGACACATTTGCAGCAAAACTGTTAGCTGCTGCTGAAAAGTATGGTTTGCCAAGACTTAAGTTGATGTGCGAGTCCGTACTTTGCAAAGATATATCTATAGATTCTGTTGCTTATATTTTGGCCCTTGCTGATCGTTATCATGCTACAGAACTGAAGTCCATCTGTCTGCAATTTTCTGCTGAAAACCTTGTTGCTGTGATGCAATCTGATGGCTTTGAGTACCTTAAGGAAAACTGTCCATTGCTGCAATCAGAACTGCTAAAGACAGTGGCAGGTTGTGAGGAGGAATTTAGTGGTGAAGGAAAATGTCGAAGTGTGTGGGCCCAGTTTTCTGATGGTGGTGACACCAATGATAGGAGTGTAAGACAACAAACATGGGAAAATGGAGTCGAAAGAAGTCAAAGCTTATGGGTTCACCTTTCTGATGGTGTTAACAACAACGATAGGAGTCCAGGGCAAGAAGCTTGA 1299 0.4727 MNNNNNNNNSNILASRTSSRSVTETVNGSHKFVIKGYSLAKGIGVGKHIASETFSVGGYQWAIYFYPDGKNPEDNSAYVSVFIALASDGTDVRALFELTLLDQSGNGKHKVHSHFERSLESGPYTLKYRGSMWGYKRFFKRAQLEASTFLKDDCLKINCTVGVVVSSIDCSKLNTIQVPDSDIGAHFGMLLENEEGSDVTFSVNGERFHAHKLVLAARSTAFETEFFNRMEEDDNEIVVTDMEPKVFKALLHFIYRDTLIEDDELFMSRSTFLPSVSDTFAAKLLAAAEKYGLPRLKLMCESVLCKDISIDSVAYILALADRYHATELKSICLQFSAENLVAVMQSDGFEYLKENCPLLQSELLKTVAGCEEEFSGEGKCRSVWAQFSDGGDTNDRSVRQQTWENGVERSQSLWVHLSDGVNNNDRSPGQEA* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2009 432 CDD MATH 28 161 IPR002083 GO:0005515
Dod01g2009 432 Gene3D Potassium Channel Kv1.1; Chain A 173 302 IPR011333 -
Dod01g2009 432 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 12 381 IPR045005 GO:0016567
Dod01g2009 432 Gene3D - 307 381 - -
Dod01g2009 432 SUPERFAMILY POZ domain 176 306 IPR011333 -
Dod01g2009 432 ProSiteProfiles BTB domain profile. 197 263 IPR000210 GO:0005515
Dod01g2009 432 Pfam BTB/POZ domain 189 306 IPR000210 GO:0005515
Dod01g2009 432 ProSiteProfiles MATH/TRAF domain profile. 27 161 IPR002083 GO:0005515
Dod01g2009 432 CDD BACK_AtBPM-like 305 366 IPR034090 -
Dod01g2009 432 CDD BTB_POZ_BPM_plant 183 305 - -
Dod01g2009 432 SUPERFAMILY TRAF domain-like 24 163 - -
Dod01g2009 432 SMART math_3 32 144 IPR002083 GO:0005515
Dod01g2009 432 MobiDBLite consensus disorder prediction 1 21 - -
Dod01g2009 432 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 26 165 IPR008974 GO:0005515
Dod01g2009 432 SMART BTB_4 197 308 IPR000210 GO:0005515
Dod01g2009 432 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 4-LIKE 12 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2009 Dod-Chr1 55845119 55854539 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2009 K10523 - gmx:100809683 819.69