Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2000 ATGGAGGCAGGCTGGGTGGAGCATGGAAGAGAGAGAGGAGTTGGGCATGTGAACAAGGTTGGTTATGTGAATGGGGTGATCAACAAGAGAAGGAAGCCTTACAGAAGGGTTAAGAGGCCAGTGATGAGGGTCCCAATGGCACTTCAGGAGCTATTTCTTTCATGCAGAGAAACTTTCAAAGGCCCTGGCACCGTTCCTTCATCACAACATGTTCAGAAACTCTGCCACATCCTTGATGACATGAAGCCAGAAGATGTTGGGCTAAGTAGAGATCTGCAGTTCTTCAAGCCAGGAAATATCATCAAAGAGAACCAAAGGGTCACATACACAACCATGTACCAATGTGATAACTTCTCACTTTGTATCTTTTTCCTCCCTGAAGGAGGAGTCATTCCCCTCCATAACCATCCGGGGATGACAGTTTTCAGCAAGCTTCTGTTAGGACGAATGCATATTAAGTCCTATGATTGGGTTGATCCTGATGAGGCCTCTGAAAACATGTTGCAACAACAATCTAAGTTGAGATTGGCAAAGCTAAAAACTGATCGTGTGTTCATAGCACCATGTGATACTTCTGTGTTGTATCCAACAACAGGAGGCAATATGCATGAATTCACAGCCATAACTCCATGTGCTGTGCTTGATGTGATTGGTCCTCCTTATTCCAAAGAAGATGGCCGGGACTGTTCTTACTACAAAGATCACCCTTATGCTGCTTTTTCAAATGAAGAGATGGCTAAGGGGAAAGGGGTGAATGATAGTTACTGGTGGCTGGAAGAAATTGATGTGCCGGAAAACTCCCAAATGGATGGCATTGAGTACCTGGGTCCTCCCATTGCTGAGACATCCTTCTAG 855 0.4515 MEAGWVEHGRERGVGHVNKVGYVNGVINKRRKPYRRVKRPVMRVPMALQELFLSCRETFKGPGTVPSSQHVQKLCHILDDMKPEDVGLSRDLQFFKPGNIIKENQRVTYTTMYQCDNFSLCIFFLPEGGVIPLHNHPGMTVFSKLLLGRMHIKSYDWVDPDEASENMLQQQSKLRLAKLKTDRVFIAPCDTSVLYPTTGGNMHEFTAITPCAVLDVIGPPYSKEDGRDCSYYKDHPYAAFSNEEMAKGKGVNDSYWWLEEIDVPENSQMDGIEYLGPPIAETSF* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2000 284 CDD cupin_ADO 116 222 - -
Dod01g2000 284 Pfam PCO_ADO 77 279 IPR012864 GO:0016702
Dod01g2000 284 SUPERFAMILY RmlC-like cupins 46 237 IPR011051 -
Dod01g2000 284 PANTHER UNCHARACTERIZED 38 280 IPR012864 GO:0016702
Dod01g2000 284 Gene3D Jelly Rolls 39 248 IPR014710 -
Dod01g2000 284 PANTHER CYSTEINE OXYGENASE/2-AMINOETHANETHIOL DIOXYGENASE, RMLC-LIKE JELLY ROLL FOLD PROTEIN-RELATED 38 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2000 Dod-Chr1 55712547 55717135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2000 K23953 - gmx:100805411 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2000 01 55712547 55717135 Dod01g2000 01 55712547 55717135 ECH