Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1992 ATGGCATCCCACATTGTTGGATACCCACGCATGGGCCCCAAGAGAGAGCTCAAGTTCGCTCTTGAGTCATTCTGGGACGGTAAGAGCAGCGCTGAGGATTTGAAGAAGGTGGCTGCTGATCTCAGAGCTTCCATCTGGAAGCAGATGGCAGGTGCCGGGATCAAGTACATCCCCAGCAACACTTTCTCATACTACGACCAGGTCCTTGACGCCACTGCCACCCTCGGCGCCGTCCCTCCCCGCTTATGGCTGGGCTGGCGGCGAGATCGGCTTTGA 276 0.5761 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRASIWKQMAGAGIKYIPSNTFSYYDQVLDATATLGAVPPRLWLGWRRDRL* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1992 91 Pfam Cobalamin-independent synthase, N-terminal domain 3 81 IPR013215 GO:0003871|GO:0008270|GO:0008652
Dod01g1992 91 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 3, CHLOROPLASTIC 1 82 - -
Dod01g1992 91 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 1 82 - -
Dod01g1992 91 SUPERFAMILY UROD/MetE-like 3 82 IPR038071 -
Dod01g1992 91 Gene3D - 1 89 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1992 Dod-Chr1 55592014 55593489 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1992 K00549 - gmx:100802039 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1992 01 55592014 55593489 Dod02g2069 02 39283914 39288511 PCT