Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1990 ATGGTGGCTCTTTCTCGTGCCCTCATCCTTGTTGCACTCACTGCTACCATCTTCTCAACGGTGGCAGTGGCAGCAGAGTTCATAGTTGGAGATGACAAAGGTTGGACAACTAACGTTGATTACCAAGCTTGGGCTGCAAACAAGGTCTTTCGTGTTGGGGACATACTTGTATTCAATTATCCTCCTCAGATGGACAACGTGGTGATAGTAAACTCAACCGATTTCACAAAATGCACGGTTGCTCCAAACGCACCAGCATTGAATAGTGGACACGATGCGATCATATTCGGAGCCACCACAGGGCCCAGATTCTACATTTCTGGTGTTGGAGATCACTGCAAATTGGGCCAAAGGCTTGCCTTATTTGTGCTGCCACATGAAGATGCACCCTCTCCAGTACCAGCTTCTTCACCAGCTGCACCCGCACCGTGGAGTGATGCACCTGAATCTCCACCCTTCATACCTCCTGTGCCTATGGCCCCTCCCTTTGTGCCCGTGCCTACTGCACCCGCACCATGGAGTCATTCACCTCCAGCTGCACCTATGGCTCCCTTTGTGCCTGCGCCATGGACTGATGCACCCGCACCTTCTCCCGAGCCTCCTTCTGCAACGTGGACTACTAGTTTCTCCCACTTCGCTCGATCGGTGCCGAGGAAACTGTTCAAAGTGTTTCAGTAA 678 0.5192 MVALSRALILVALTATIFSTVAVAAEFIVGDDKGWTTNVDYQAWAANKVFRVGDILVFNYPPQMDNVVIVNSTDFTKCTVAPNAPALNSGHDAIIFGATTGPRFYISGVGDHCKLGQRLALFVLPHEDAPSPVPASSPAAPAPWSDAPESPPFIPPVPMAPPFVPVPTAPAPWSHSPPAAPMAPFVPAPWTDAPAPSPEPPSATWTTSFSHFARSVPRKLFKVFQ* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1990 225 Gene3D - 23 128 IPR008972 -
Dod01g1990 225 Pfam Plastocyanin-like domain 35 117 IPR003245 GO:0009055
Dod01g1990 225 CDD Phytocyanin 25 123 - -
Dod01g1990 225 PANTHER BLUE COPPER PROTEIN-LIKE 5 140 - -
Dod01g1990 225 PANTHER BLUE COPPER PROTEIN 5 140 IPR039391 GO:0009055
Dod01g1990 225 SUPERFAMILY Cupredoxins 24 124 IPR008972 -
Dod01g1990 225 ProSiteProfiles Phytocyanin domain profile. 25 125 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1990 Dod-Chr1 55578701 55580135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1990 7 124 Miscellaneous Gene Families AT5G26330 39.344 7.14e-21 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1990 - - mtr:MTR_7g086090 153.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1990 01 55578701 55580135 Dod01g1990 01 55578701 55580135 ECH