Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1988 ATGGAAACCAAGCCAGCAGCAACTTATAATCGGTATTATGAAGATTTTGACCCTGTCTCCAAGTGGCGTGTAGAAGAGACCCGTGACACCGTTGAACTTTATCTTCCAGGTTTTAAGAGGGAGCAAATTCGAATTCAGATCAACCATCTTGGTTTTATCGTAATAAGCGGAGAGCGTCAAGTGGATGGAACCAAATGGAGGCGTTTCAAGAAAGAAATTGAACTCCCAATGCACTGCAACGTAGATGCTATTCATGGAAACTTCATGCAAAACATTCTCACCGTTGTGCTGCCAAAGAAAATTCCTCCTCCAGCTGTTCATCATCAAGAAGAACAAGAGATCAGACAAATCCCAGAGTTCGAACTCGAGACCAAAAAGAAAGAGAAAGGAAAAAAGAAAGTAACATATGATGATGAGAATATGGAATTTGGTGGAGAATGGGGCACTGAAGAAATGACTGAAACCAGAGCCAAAGGGGCACTAACAGAGGATATTCATGACACAACAAGGCACCAGCTTGTGGAAAATGATGAGGTGTTAACGCCAGAAACGACTAGAGAGGTTGCCCTTAAATTCATGCTTGTGATCATTGTGATTATTGGTTATAGCAAGTTACCTTGCTGGATATGA 630 0.4175 METKPAATYNRYYEDFDPVSKWRVEETRDTVELYLPGFKREQIRIQINHLGFIVISGERQVDGTKWRRFKKEIELPMHCNVDAIHGNFMQNILTVVLPKKIPPPAVHHQEEQEIRQIPEFELETKKKEKGKKKVTYDDENMEFGGEWGTEEMTETRAKGALTEDIHDTTRHQLVENDEVLTPETTREVALKFMLVIIVIIGYSKLPCWI* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1988 209 Pfam Hsp20/alpha crystallin family 23 109 IPR002068 -
Dod01g1988 209 Gene3D - 6 139 IPR008978 -
Dod01g1988 209 CDD ACD_sHsps-like 24 99 - -
Dod01g1988 209 PANTHER HEAT SHOCK PROTEIN 26 8 200 IPR045045 -
Dod01g1988 209 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 8 200 - -
Dod01g1988 209 SUPERFAMILY HSP20-like chaperones 10 100 IPR008978 -
Dod01g1988 209 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 10 117 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1988 Dod-Chr1 55561212 55563045 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1988 - - ahf:112696952 199.134