Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1987 ATGTCTTCATCAAGCTCGGCGGTTGCCGCAGAAGGTCAACCCAAGAAGAAATCCAGGAAGCCCAACTATTCTAGATTTACACAGCAAGAACTTCCTGCATGGCAGCCGATTCTAACACCTGGATGGGTCATTTCAATATTCACATTTATAGGACTAGTATTTGTCCCTCTTGGTCTAGCTTCACTGTTTGCATCACAGGGGGTGGTGGAAGTTCCACTGCGATATGATGATCAATGCCTTCCAGCAATTTTCAAATACCATGCAGTGGATTATATTAAAGATGATAGGATGAACAAGACTTGCATACAGAAATGGAGTGTTAAGAATAAAATGAAAGCCCCAGTTTTCGTCTACTATCAGCTTGATGACTTTTACCAGAACCATCGCCGATATGTTAAAAGTAGAAGTGATAATCAACTGAGGAGTAAGGCAGCTGAGAATGAATACAGAATTTCAACCCAGAAGAATAATTTGGTGATCAACAAAAAGAACATAGCATGGAAGAGTGACCGAACGAAAAAATTTGGGTCTGATGTTTATCCAAAAAATTTTCAAGCTGGAGGTTTGATTGGGGGTGCTAAACTCAATGAAAGCATACCTTTGAGTGAACAAGAGGATCTCATCGTTTGGATGCGAACAGCAGCACTGCCAACTTTCAGAAAATTATATGGAAAGATTGAGTCTGATCTTGAAGTTAATGATGAATTAATGATAGTGATAGAGAACAATTACAATACATATGAGTTTGGCGGCAAAAAAAGCCTGGTTCTTTCAACCACAACTTGGATTGGTGGAAGAAATCACTTCTTGGGGATGGCATATATTTTCATTGGTGGCTTTTCCTTGTTACTGTCTGTGGGTTTCCTAGTCCTGTATGTGATGAGGCCAAGACCTCTTGGGGATCCATCATACTTGTCTTGGAACAAAAATCCAATAAGTTTAAGAAGTTGA 951 0.3975 MSSSSSAVAAEGQPKKKSRKPNYSRFTQQELPAWQPILTPGWVISIFTFIGLVFVPLGLASLFASQGVVEVPLRYDDQCLPAIFKYHAVDYIKDDRMNKTCIQKWSVKNKMKAPVFVYYQLDDFYQNHRRYVKSRSDNQLRSKAAENEYRISTQKNNLVINKKNIAWKSDRTKKFGSDVYPKNFQAGGLIGGAKLNESIPLSEQEDLIVWMRTAALPTFRKLYGKIESDLEVNDELMIVIENNYNTYEFGGKKSLVLSTTTWIGGRNHFLGMAYIFIGGFSLLLSVGFLVLYVMRPRPLGDPSYLSWNKNPISLRS* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1987 316 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 62 149 IPR005045 GO:0016020
Dod01g1987 316 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 156 297 IPR005045 GO:0016020
Dod01g1987 316 PANTHER CELL CYCLE CONTROL PROTEIN 50 147 314 IPR005045 GO:0016020
Dod01g1987 316 MobiDBLite consensus disorder prediction 1 22 - -
Dod01g1987 316 PIRSF Lem3/Cdc50 1 153 IPR005045 GO:0016020
Dod01g1987 316 PIRSF Lem3/Cdc50 146 310 IPR005045 GO:0016020
Dod01g1987 316 PANTHER CELL CYCLE CONTROL PROTEIN 50 12 148 IPR005045 GO:0016020
Dod01g1987 316 PANTHER ALA-INTERACTING SUBUNIT 147 314 - -
Dod01g1987 316 PANTHER ALA-INTERACTING SUBUNIT 12 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1987 Dod-Chr1 55539545 55543156 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1987 - - gmx:100779539 473.011