Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1986 ATGCAGACTAGGACGGTTCAAGTGAAGCAACTCTCAGATCTAGCCGGTGAGAGAGAGATTCATGAGTTCTTCTCTTTCTCTGGAGAAATTGAGCACATTCAGATCCTCAGTGAACAAGGGAAATCAAAGACTGCATTTGTGACATTTAAAGACCCCAAAGCGCTTGAAATTGCATTATTATTATCGGGAGCAACAATAGTAGACCAGATTGTGAGTATAACACCAGCTGAGAACTATGTACCAAATCGTGAGATGCAGGAAGTGAGGGTGGTGGAAAATGCTATAAATGTAGCTCCTTCTGGAGATGCTGAGCTGAATATTGAGGATGAGAAAGCCAGCCCTACCAATGGAAGAATATACCTTAGTAGAGCACAGGATGTAGTTACGAGTATAATGGCAAAAGGTTCGGCAATAAGGCAAGATGCAGTTAACAAAGCTAAAGCATTTGATGAAAAACATCAGTTGACTGCTAATGCATCTGCAAAGGTTATTTCTTTTGACAAGAGAGTTGGCCTGACAGAGAAATTGACAGTTGGCATTTCTGCGGTGAATGAGAAAGTGAAGTCTGTGGATCAGAGGCTTCATGTTTCTGATAAAACAATGGCAGCAATATTTGCAGCGGAGAGGAAGTTGAATGACACTGGATCAGCTGTCAAAACAAGCAGATATGTGACTGCTGGAACAGCTTGGTTAAATGGCGCTTTTAGCAAGGTGGCAAAGGCTGGGCATGTTGCTGGTACTAAAACCAGAGAAAAGTTTCATTTGGCTGTTTCAAACTTGACAGCAAAGGTTGGTTATGCTCTTGCAATATCAAGAAATCTAAACCAGTATTTGTATTCTGCATTAGTTCTTTTTCTTTTTATCTGGGACTTTGTGGGTATGATGCATGGATACTTCAAAATAATCTACGTACCCATATTGGATACGTATTGTATTGGATTCTTTACTGATACTTTTAATTATATTTTACATTTTTTAAATTTTATTTATACCATTTCTGTGCATCGTACTTATGTTGTATCGGGTACTCCTACCCATTTCCGTGCAACATAG 1053 0.3941 MQTRTVQVKQLSDLAGEREIHEFFSFSGEIEHIQILSEQGKSKTAFVTFKDPKALEIALLLSGATIVDQIVSITPAENYVPNREMQEVRVVENAINVAPSGDAELNIEDEKASPTNGRIYLSRAQDVVTSIMAKGSAIRQDAVNKAKAFDEKHQLTANASAKVISFDKRVGLTEKLTVGISAVNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTAWLNGAFSKVAKAGHVAGTKTREKFHLAVSNLTAKVGYALAISRNLNQYLYSALVLFLFIWDFVGMMHGYFKIIYVPILDTYCIGFFTDTFNYILHFLNFIYTISVHRTYVVSGTPTHFRAT* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1986 350 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 66 IPR000504 GO:0003723
Dod01g1986 350 SUPERFAMILY RNA-binding domain, RBD 2 84 IPR035979 GO:0003676
Dod01g1986 350 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Dod01g1986 350 SMART rrm1_1 5 74 IPR000504 GO:0003723
Dod01g1986 350 PANTHER RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED 1 265 - -
Dod01g1986 350 Gene3D - 1 88 IPR012677 -
Dod01g1986 350 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1986 Dod-Chr1 55525812 55530484 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1986 - - gmx:100779011 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1986 01 55525812 55530484 Dod01g1986 01 55525812 55530484 ECH