Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1970 ATGGCTACCGACCCGACTCAGCAGCAAATTGCCCTGATCCTGGGCCCCGACCGGGCCCACCTGGAATTGCTAATCACAACCCTGACGTCGGCCACCATGAACGAGCAGCGGGCCCAGGCCGAGTCCCTCTTCGACGCCTGTAAGCAGGCTCACCCTGACTCCCTCTGCCTGGGCCTGGCCCACCTCCTCCACTCCTCCCCCAACCCCGAGACCCGCACCGTCTCCGCCGTCCTCCTCCGCCGCCACCTCACCCCTCGCGGCACCTCATCCTCCTCCTTCCTCTGGCCCCGCCTCTCCCTCGCCACCCACTCCGCCCTCAAGTCCCTCCTCCTCACCTCCCTCCATCGCGAGCCCATCACCTCCGTCGCCAAGAAGCTCTCCCACACCGTCGCCGAGCTCGCCTCCGCCCTCCTCCCCGACAACTCCTGGCCCGACCTCCTCCCCCTCCTCTTCCAGTGGGTCACCTCCGACCACCCCAAGCTCCAGGAGATCTCTCTATTGATCTTCGCCGAGCTCGCTGAATACGTCGGCGAAACCCTAATCCCTCAACTGGCCACTCTCCACGCCGTCTTCCTCCGCTGCCTCGGCGCCAACGTCACCTACGATGTCCGAATCGCCGCCCTCGCCGCCAGCATCAGTTTCGTCCAAGGGTTAACGAATTCCGCCGATAGGGATAGGTTCCAGGATTTGCTGCCGCTAATGATGCAGACGCTGACGGAGGCGCTGAATTCCGGCCAGGAGGCGACGGCGCAGGAGGCACTGGAGCTCTTGATCGAGCTCGCCGGGACGGAGCCGAGGTTCCTCCGGCGGCAGATTGTGGAGGTTGTGGGGTCCATGCTGCAGGTGGCGGAGGCGGAGTCGTTGGAGGAAGGGACAAGGCATTTGGCAATTGAGTTCGTTGTGACGCTGGCGGAGGCGAGGGAGAGGGCACCGGGGATGATGAGGAAGTTGCCGCAGTTTATTAGCAGGTTGTTTGTGGTGCTGATGAATTTGTTGCTTGATGTTGAGGATGATCCGGCATGGCATAGCGCCCAGCCGGAGGATGAGGATGCTGGCGAGACCAGCAATTATGGTTTTGGGCAGGAGTGTTTGGATAGGCTGGCGATTTCTTTGGGCGGGAACACGATTGTGCCGGTTGCCTCGGAGCTGCTCCCTAGTTACTTGGCTGCTCCTGAGTGGCAGAAGCACCATGCTGCCCTCATTGCACTTGCGCAAATCGCAGAGGGTTGTTCAAAGGTCATGGTAAAGAATCTGGAGCAGGTGTTGTCGATGGTTTTAAATTCGTTTAGCCATTCCCACCCCCGTGTGCGATGGGCGGCTATAAATGCAATTGGTCAATTGTCCACAGATTTGGGGCCGGACTTGCAGACCAAATATCATCATTTAGTGCTGCCAGCATTAGCTGGTGCCATGGATGATTTCCAAAATGCCCGTGTACAGGCTCATGCTGCTTCTGCAGTTCTAAATTTCACTGAGAATTGTACCTCAGCTATCCTAACACCTTACTTAGATGGGATTGTGAGCAAGCTTCTTGTGCTCTTACAGAATGGGAAGCAAATGGTTCAAGAAGCGGCTTTGACAGCTTTAGCATCAGTTGCTGATTCTTCACAGGAGCAATTTCAGAAGTATTATGATGCTGTGATGCCTTACTTAAAGGCTATTTTGATGAATGCAAATGATAAATCCAATCGTATGCTTCGTGCAAAAGCAATGGAGTGCATTAGTTTAGTAGGAATGGCTGTTGGAAAGGACAAGTTCAGGGACGATGCCAAACAGGTCATGGATGTCTTGATGTCACTGCAACAATCTCAGTTGGAGGCTGATGATCCAACTTCAAGTTACACGTTACAGGCATGGGCGCGACTTTGCAAGTGCCTTGGGCAGGATTTTCTCCCATATATGGGTTTTGTCATGCCTCCCCTACTCCAGTCTGCACAACTTAAGCCTGATGTGACCATTACATCAGCAGATTCTGATACTGAATTTGATGAAGACGATGACAGCATTGAAACAATCACCCTTGGGGATAAAAGGATAGGCATCAAGACCAGTGTCCTGGAGGAGAAGGCTACAGCTTGTAACATGCTATGCTGCTATGCTGATGAGTTGAAGGAAGGATTCTTTCCATGGATTGAACAGGTTGCTTTTACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCAGCAGTTTCAGCTATGCCAGAACTGTTGTCCTCAGCAAAATCCGCTGTTGAGAAGGGGCAAGCCCAAGGTCGTGATGAGACCTACATAAAACAGTTGTTTGATTATATAATACCAAATTTGGTGGAGGCTTTACACAAGGAGCCAGAGGTAGAGATTTGTGCAAGCATGTTGGACGCATTGAATGAATGCATACAGGTGTCTGGACCACATTTAGATGAAAATCAAGTTCGAAGCATTGTTGACGAGATTAAACATGTCATTACAGCCAGTTCATCAAGAAAACATGAAAGAGCAGAGAGGGCCAAGGAAGAGGACTTCGATGCTGAAGAGAGGGAACTACTCAAGGAAGAAAATGAGCAAGAAGAAGAACTTTTTGATCAAGTTGGTGATTGCTTGGGGACTTTGATAAAAACATTTAGGGCATCTTTCTTGCCGTTCTTTGATGAGCTTTTCTCATACCTTACACTTATGTTTGGTAAAGATAAAACCTCAGAGGAAAGGAGAATTGCCATTTGTATATTTGATGATGTTGCTGAGCACTGTCGTGAAGCAGCTCTCAAATATTATGATTCTTACCTTCCATTCTTACTTGAGGCTTGCAATGATGAATATCCTGATGTTCGGCAGGCAGCTGTTTATGGGGTTGGTGTTTGTGCAGAGTTTGGTGGATCTGTTTTTAGGCCCCTTGTTGGAGAGGCATTTTCAAGGCTAGATGCTGTGATAAGGCATCCAAATGCACTACATTGTGATAATGTAATGGCATATGACAATGCCGTTTCAGCTCTTGGAAAAATATGCCAATTCCACCGTGATAGCATAAATGCAGCACAGGTTGTTCCTGCCTGGTTAAGTTGCTTGCCTATAAAAGGTGATTTAATTGAGGCCAAGGTTGTGCATGACCAACTTTGCTCAATGGTTGAAAGGTCAGATCGAGAACTTATGGGGCCCAACAATCAATATCTTCCCAAAATAGTTGCAGTTTTTGCTGAGATTTTATGTGCGGGCAATGATCTGGCAACTGAGCAAACTGTCAGTCGGATGATCAATCTGTTGATGCAGCTTCAACAGACTTTGCCGCCTTCTACCCTCGCTTCAACCTGGTCATCCTTGCAGCCTCAGCATCGGCTTGCACTTCAGTCCATTCTATCATCCTAG 3354 0.5027 MATDPTQQQIALILGPDRAHLELLITTLTSATMNEQRAQAESLFDACKQAHPDSLCLGLAHLLHSSPNPETRTVSAVLLRRHLTPRGTSSSSFLWPRLSLATHSALKSLLLTSLHREPITSVAKKLSHTVAELASALLPDNSWPDLLPLLFQWVTSDHPKLQEISLLIFAELAEYVGETLIPQLATLHAVFLRCLGANVTYDVRIAALAASISFVQGLTNSADRDRFQDLLPLMMQTLTEALNSGQEATAQEALELLIELAGTEPRFLRRQIVEVVGSMLQVAEAESLEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFISRLFVVLMNLLLDVEDDPAWHSAQPEDEDAGETSNYGFGQECLDRLAISLGGNTIVPVASELLPSYLAAPEWQKHHAALIALAQIAEGCSKVMVKNLEQVLSMVLNSFSHSHPRVRWAAINAIGQLSTDLGPDLQTKYHHLVLPALAGAMDDFQNARVQAHAASAVLNFTENCTSAILTPYLDGIVSKLLVLLQNGKQMVQEAALTALASVADSSQEQFQKYYDAVMPYLKAILMNANDKSNRMLRAKAMECISLVGMAVGKDKFRDDAKQVMDVLMSLQQSQLEADDPTSSYTLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVTITSADSDTEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIEQVAFTLVPLLKFYFHEEVRKAAVSAMPELLSSAKSAVEKGQAQGRDETYIKQLFDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGPHLDENQVRSIVDEIKHVITASSSRKHERAERAKEEDFDAEERELLKEENEQEEELFDQVGDCLGTLIKTFRASFLPFFDELFSYLTLMFGKDKTSEERRIAICIFDDVAEHCREAALKYYDSYLPFLLEACNDEYPDVRQAAVYGVGVCAEFGGSVFRPLVGEAFSRLDAVIRHPNALHCDNVMAYDNAVSALGKICQFHRDSINAAQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELMGPNNQYLPKIVAVFAEILCAGNDLATEQTVSRMINLLMQLQQTLPPSTLASTWSSLQPQHRLALQSILSS* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1970 1117 Coils Coil 832 856 - -
Dod01g1970 1117 Pfam Importin repeat 6 786 888 IPR041389 -
Dod01g1970 1117 PANTHER BNAC09G37860D PROTEIN 16 1116 - -
Dod01g1970 1117 Pfam HEAT repeats 386 486 - -
Dod01g1970 1117 PANTHER IMPORTIN BETA 16 1116 IPR040122 GO:0006606
Dod01g1970 1117 Pfam Importin repeat 287 378 IPR041653 -
Dod01g1970 1117 SUPERFAMILY ARM repeat 21 956 IPR016024 -
Dod01g1970 1117 Gene3D - 18 1116 IPR011989 -
Dod01g1970 1117 Pfam Interferon-related developmental regulator (IFRD) 491 626 IPR007701 -
Dod01g1970 1117 Pfam HEAT repeat 926 953 IPR000357 GO:0005515
Dod01g1970 1117 SMART TOG_3 370 611 IPR034085 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1970 Dod-Chr1 55234789 55246355 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1970 K20222 - gmx:100797431 1873.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1970 01 55234789 55246355 Dod01g1970 01 55234789 55246355 ECH