Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1960 ATGGAAATTATGGTGACGCCATTGATGAGGGTCTCCCCATTTTCTCGCCTAAATTTCCCCTCTAATAATAATAATAATTATTATTATAATCATTATAATTATAATTATAATTATAAAGCACCTCTCTTCCCTCTTACCTCCCTTATACGCCAACGCCACTCTCCTCCCAAACCAAACTCCCTCACCATACTCTCCATGGCCGCTTCTTCTCAATCCAAAGCTCCGATTGTGTCCCCTGACGGCGTATTTCAATTAATTCAGGCACATCAGGAAAAAGCTGCTAGACTTCCACCAGTTGAAGAAGTTCGTACTTTCCTTGATCGTAGCGTGCGTGGGATGCTCTCTACATTCTCTAAGAAAGTTGAGGGTTATCCGTCAGGGTCTATGGTTGACTTTGCATGTGATGCAAATGGATACCCTATACTAGCAGTGAGCGACTTGGCGGTTCATACAAAGGACTTAGCTGCTAATCCTAAATGTTCATTGGTGGTGCCTAGAGATCCTGAAGATAGGACTGATTTAGTGATCACTTTACATGGTGATGCTATCTCTGTACCTGAAAAGGACAAAGAAGCTGTGCGAGCTTCATATTTGGCAAAACATCCTAATGCATTTTGGGTTGATTTTGGTGACTTCTATTTTCTGCGCATTGAACCAAAAGTTGTACGATTTGTGTCAGGTGTTGCCACAGCTTTGTTAGGATCAGGAGAGTTTAGTGGAGATGAGTATAGAGCTGCAAAAGTTGATCCTATAGCTCAGTTTTCGAAGCCAGTGGCGTCTCATATGAACAAAGATCATGCTGAAGATACAAAAGTGATTGTGCAGCACTGGACCTCAGTTCCGGTGGAATTTGCATACATGCTAGATGTGGATAGTGTTGGTTTCAATGTTAAGGCTGGTTATCAGGGTGATACTTTCAAGCTTAGAGTACCTTTTCCTCGACGTGCAGAAGATAGAAAGGATGTTAAGACTCTCATTGTTGAGATGCTTCAAGCTGCTCGGCCTCATGATTGA 1014 0.4221 MEIMVTPLMRVSPFSRLNFPSNNNNNYYYNHYNYNYNYKAPLFPLTSLIRQRHSPPKPNSLTILSMAASSQSKAPIVSPDGVFQLIQAHQEKAARLPPVEEVRTFLDRSVRGMLSTFSKKVEGYPSGSMVDFACDANGYPILAVSDLAVHTKDLAANPKCSLVVPRDPEDRTDLVITLHGDAISVPEKDKEAVRASYLAKHPNAFWVDFGDFYFLRIEPKVVRFVSGVATALLGSGEFSGDEYRAAKVDPIAQFSKPVASHMNKDHAEDTKVIVQHWTSVPVEFAYMLDVDSVGFNVKAGYQGDTFKLRVPFPRRAEDRKDVKTLIVEMLQAARPHD* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1960 337 SUPERFAMILY FMN-binding split barrel 100 335 - -
Dod01g1960 337 Pfam Pyridoxamine 5'-phosphate oxidase 103 226 - -
Dod01g1960 337 PANTHER FMN-BINDING SPLIT BARREL-RELATED 69 334 - -
Dod01g1960 337 Pfam Domain of unknown function (DUF2470) 256 329 IPR019595 -
Dod01g1960 337 PANTHER CREG1 PROTEIN 69 334 - -
Dod01g1960 337 Gene3D - 248 337 IPR037119 -
Dod01g1960 337 Gene3D - 77 233 IPR012349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1960 Dod-Chr1 54844894 54850425 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1960 - - gmx:100792427 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1960 01 54844894 54850425 Dod01g1960 01 54844894 54850425 ECH