Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1958 ATGTCTACTCTGAGCAATTCAACAAATATATTTTGGCAAGAATGCCAAATAGGAAAGCCTGAGAGACAGAAGCTACTTGACCAAAAGGGATGTGTTGTATGGATTACAGGACTCAGCGGATCTGGCAAAAGCACATTGGCATGTTCACTAAGCAGAGAACTGCACTCAAGGGGAAAGTTATCTTATGTCCTTGACGGAGATAACCTTCGGCATGGACTAAACAAGGATCTTGGTTTTAAACATGAAGACCGTACTGAAAATATTCGCAGAACAGGAGAAGTGGCAAAACTCTTTGCCGATGCTGGTCTAATATGTGTTGCCAGTCTGATATCTCCTTATAGAAGAGATCGAGACACTTGCCGTGCCATGCTGCCTGATGCCAATTTTATTGAGGAAAGGCTTCGTTTGGCATTTCTCATTAAATTGTGTGAGGCACGAGATCCAAAAGGCCTCTATAAGCTTGCTCGTGCAGGAAAGATCAAAGGTTTTACTGGGATTGATGATCCTTATGAACCACCCATAAATTGTGAGATAGAAATAAAGCAGGAAGATGGAGTCTGTCCAACGCCCACTGTGATGGCTGGACTAGTAGTTTCTTACTTGCAGAAGAAAGGATTTCTTGCATGTTAG 630 0.4254 MSTLSNSTNIFWQECQIGKPERQKLLDQKGCVVWITGLSGSGKSTLACSLSRELHSRGKLSYVLDGDNLRHGLNKDLGFKHEDRTENIRRTGEVAKLFADAGLICVASLISPYRRDRDTCRAMLPDANFIEERLRLAFLIKLCEARDPKGLYKLARAGKIKGFTGIDDPYEPPINCEIEIKQEDGVCPTPTVMAGLVVSYLQKKGFLAC* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1958 209 CDD APSK 32 181 IPR002891 GO:0000103|GO:0004020|GO:0005524
Dod01g1958 209 Gene3D - 2 208 IPR027417 -
Dod01g1958 209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 203 IPR027417 -
Dod01g1958 209 TIGRFAM apsK: adenylyl-sulfate kinase 12 183 IPR002891 GO:0000103|GO:0004020|GO:0005524
Dod01g1958 209 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 1 208 - -
Dod01g1958 209 PANTHER ADENYLYL-SULFATE KINASE 1, CHLOROPLASTIC 1 208 - -
Dod01g1958 209 Pfam Adenylylsulphate kinase 29 183 - -
Dod01g1958 209 Hamap Adenylyl-sulfate kinase [cysC]. 28 205 IPR002891 GO:0000103|GO:0004020|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1958 Dod-Chr1 54829531 54832947 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1958 K00860 - gmx:100793200 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1958 01 54829531 54832947 Dod01g1958 01 54829531 54832947 ECH