Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1951 ATGATGCTAGGACCGAGTTGCAAGACAACCAAAATCAAAATCAAATCAATGGTTGCTTTTTGTGTCAGTGTATCACATAGGCATATAGGAGAGGAGGAATTCAAAGCAACAAGGACTACCTTAGTAGGAGCAGCGAGCCATATGCAAAAATATACCCTTTTGAAAAAAGAATGCCAAAAATGGGTTTTGGTGATGTTTACTTGGTGCTATGTGGGAATCGCGTCGGATTCACGTACTTGTTTGGAACCATTCATATTTATAGTCATCACTTGGGGGAAGTGGCAGTTCAACCCACGTTTTGTTTTCTTATGTTACATGCTTGTAAGTTATGTAATCTCACTCAGCTTCAACACTGCTGTTGTTACTGTTTCTGAAAGCCTGGTACAGCATTTCCCTCTCCATTTCTTGTTCTTACAGTTGGCAAGAAGAACAATGAATGCACTGGTAGCCACCAACAGGAACTTTAAGTTGGCCTCTCGGCTTCTTGGATTGGATTCCAAGCTTGAGAAGAGTTTACTGATCCCATTCAGGGAAATAAAGGTTGAATGCACCTTACCAAAAGATGATGGCACGCTGGCAACATATGTTGGGTTCAGGGTTCAACATGACAATGCCAGAGGCCCTATGAAAGGAGGAATAAGATACCATCCTGAGGTTGACCCAGATGAAGTGAATGCTTTAGCACAACTAATGACATGGAAAACAGCTGTAGCAAACATACCATATGGTGGTGCCAAAGGAGGAATAGGATGCAACCCATCAGAACTAAGTTGTTCTGAGTTAGAAAGACTCACTAGAGTTTTCACCCAGAAAATTCATGACCTGATTGGAACTCACACAGATGTGCCAGCACCTGATATGGGAACAGGACCACAGACTATGGCATGGATACTAGATGAGTATTCCAAATTTCATGGATACTCTCCTGCTGTAGTGACTGGAAAACCATTAGATCTTGGTGGTTCTCTAGGTAGAGATGCAGCTACAGGACGAGGAGTCCTCTTTGCAACAGAGGCTTTGCTTAACGAGCATGGAAAGAGCGTATCTGGACAACGGTTTGTCATACAGGGTTTTGGAAATGTGGGGTCTTGGGCTGCCCAGTTAATCAGTGAGAAAGGTGGAAAAGTTGTTGCTGTGAGTGACATAACTGGGGCCATAAAGAACAGCAATGGTCTTGACATTCCAAGCTTGCTCAAGCATTCCAAGGAGCACAAAGGAGTAAAAGGATTCCACGGTGGTGATGCAATTGATCCTAAGTCAATATTGGTTGAAGACTGCGATGTTCTTGTGCCAGCAGCTCTTGGCGGTGTCATCAATAGGGAAAATGCAAATGAAATCAAAGCCAAATTTATTATTGAAGCAGCCAACCACCCAACTGACCCAGAGGCTGATGAGATTCTGAAGAAGAAAGGTGTTGTGATCCTTCCAGACATATATGCAAACTCAGGAGGTGTTACAGTTAGCTACTTTGAGTGGGTTCAGAACATCCAAGGGTTCATGTGGGATGAGGAGAAAGTGAACGATGAGCTAAAGAACTACATGACCAAAGGTTTCAAAGATGTGAAGGACATGTGCAAAACCCATGATTGTGATCTTCGCATGGGAGCCTTCACCCTTGCAGTTAACCGTGTAGCACGGGCCACTGTCCTTAGGGGTTGGGAAGCTTGA 1668 0.4376 MMLGPSCKTTKIKIKSMVAFCVSVSHRHIGEEEFKATRTTLVGAASHMQKYTLLKKECQKWVLVMFTWCYVGIASDSRTCLEPFIFIVITWGKWQFNPRFVFLCYMLVSYVISLSFNTAVVTVSESLVQHFPLHFLFLQLARRTMNALVATNRNFKLASRLLGLDSKLEKSLLIPFREIKVECTLPKDDGTLATYVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPSELSCSELERLTRVFTQKIHDLIGTHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPLDLGGSLGRDAATGRGVLFATEALLNEHGKSVSGQRFVIQGFGNVGSWAAQLISEKGGKVVAVSDITGAIKNSNGLDIPSLLKHSKEHKGVKGFHGGDAIDPKSILVEDCDVLVPAALGGVINRENANEIKAKFIIEAANHPTDPEADEILKKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWDEEKVNDELKNYMTKGFKDVKDMCKTHDCDLRMGAFTLAVNRVARATVLRGWEA* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1951 555 SMART ELFV_dehydrog_3 322 552 IPR006096 GO:0006520|GO:0016491
Dod01g1951 555 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 177 303 IPR006097 GO:0006520|GO:0016491
Dod01g1951 555 Gene3D - 320 554 - -
Dod01g1951 555 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 246 IPR006095 GO:0006520|GO:0016491
Dod01g1951 555 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 311 333 IPR006095 GO:0006520|GO:0016491
Dod01g1951 555 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 480 491 IPR006095 GO:0006520|GO:0016491
Dod01g1951 555 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 353 373 IPR006095 GO:0006520|GO:0016491
Dod01g1951 555 CDD NAD_bind_1_Glu_DH 320 546 IPR033922 GO:0016639
Dod01g1951 555 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 320 552 IPR006096 GO:0006520|GO:0016491
Dod01g1951 555 ProSitePatterns Glu / Leu / Phe / Val dehydrogenases active site. 240 253 IPR033524 -
Dod01g1951 555 Gene3D Leucine Dehydrogenase, chain A, domain 1 177 319 - -
Dod01g1951 555 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 136 322 IPR046346 -
Dod01g1951 555 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 320 553 IPR036291 -
Dod01g1951 555 PANTHER GLUTAMATE DEHYDROGENASE 129 549 - -
Dod01g1951 555 PANTHER BNAA05G37230D PROTEIN 129 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1951 Dod-Chr1 54789541 54796803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1951 145 440 EF-hand Containing Proteins AT5G07440 79.054 2.59e-177 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1951 K00261 - gmx:100789509 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1951 01 54789541 54796803 Dod01g1951 01 54789541 54796803 ECH