Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1948 ATGGCAGCTGTTGCTCCTTCCTCTGACAAAGCCGCAGATTTACTGCAAAATTTGTCCTTGGATTCGGAGCCCCAGACCATAGGAGTTCCTGAGCCTGCAAAAAAGAATGGACCTGCTTTCTCGACTGGTGCAGCTAAGGGGATGAACAAGCCATTCAATCCTAATGCAAGCTTTGTTCCAAATGGGTACCCTTCTACTGCATACTATTATGGAGGTTATGAAGGGCAAGGCGATTGGAATATGTATTCTAGATATATGAACCTTGATGGAGGGATGCCTCAGGGTGTTTATGGAGATAGCTTCTCTTATATGTACAATCAGGGTGGTTATGGTTATACACCATATGGAGCATATCCACCGCCCACTTCCTCTTCTCCAACCATTCAACATGACGGTCAACTATATGGGATGCAACAGTATCACTATCCTTGTTCTTATTACCAATCTCCAGCTTCTGCTGATATGTCACTTGCTTCTAACAAAATCAGTGTTCCACAAGGGGGAATATCAAGTGCAGTTAATGCTGGTCATGTCCCTTCATCAAACCTTATGAATAAAGGGAATGCTGTGAGTGTGGCCAATGCTGACTGCTCAGACAAAAATGGGTTGAATGCATTTTTACAAAGTACCCATCATACTTTTTTGAATTCAAATGGTTCTTACCAAGGGGCTAGCTTGCCAGCATCTGTTCCTTTGTCTGGACACCAGGGTCCGAGAATTAGTACTCATGGTCCACAGTCAGCGGTTCCTTCGGACCTATCATTAATTTCTGATAGGCAGTTCAAACATGGAGCAAAGGTTGGATTGTCTTCACCGGTTGCTCCTGTCAAAGATTTAACAACACAAAGAAATCAGAGACTTCCTCATCCTCTTCCACAGTTTACGAACTTGCATGGTTCCCAAAATCCAACTGGACTGGATCTGGTTTCTGGATTCATGAACAGGATGTATCCAAGCAACCGGATGTACAGTCAATATGCAAACACACTTCGAGCTAATTCTCATTTTGGATCTTCTGCATATGGATCTAGAACAGGTTTTGTTGACTACAAGCTTAAAGCCACAGGTGATGGTTATGGTGTTGACCTTTTGAAAAAGAACATTGATGGTTTTGGTGAGATGAATAAGGGACCCAGAGCTTCCAAGAGTTCTGATAATAAGAGTGTTAAAAGTCTTGGACCTGTCACCTTATTACTCAAGGGACAGGACCTACCTGTGAAGAGTGATTCTGATAACAAAGAAGTGCTTCAGGTTCCCAATAAGGAGCAGTACAATGGGGAAAGTTTTTCTGAGAATTACTCTGATGCAAAGTTTTTTGTCATTAAATCGTATAGTGAAGATGATATTCACAAAAGCATAAAATATAGTGTTTGGGCAAGCACCCCTAATGGCAACAAAAAGCTGGATGCAGCATATCAGGAGGCTAAGGAGAAGCTTGGTGGCTGTCCCATATTTTTGTTATTTTCGGTCAACACTAGTGGTCAATTTGTTGGTTTAGCAGAGATGATGGGTCCTGTTGACTTCGGTAAAACTGTAGAATATTGGCAGCAGGACAGGTGGACCGGTTGCTTTGCTGTCAAGTGGCATGTCATAAAGGACATCCCAAATAGCGTGTTGAGGCACATAACACTTGAAAACAATGAAAACAGACCAGTTACTAATAGCAGGGACACTCAGGAGGTTAAGTTGGAGAAGGGTATTCAGATTGCCAAAATTTTCAAGGAGCATTCAAGCGAAACATGCATCTTGGATGATTTCGGGTTCTATGAGGCTCGCGAGAAGGCGACTCAGGAGAGAAAATCTAATGAACAACAGCTCGCAAAACAGGTCAGCAAGCCTGGCGATCTAACAATTGGGTCAGTGCTATTGCCCAAGACTCTTGATGGTACCTTGCTGAATGGGTCAGCCACCGCAGATACTGCTGAAGGAAGGGTGAAAGCAGAGGAGCTGTTAGAAGGGAGTGGAGCCACCACAGCACTTGAAGACCCTTCCAAGAGCTGTTAA 2004 0.4346 MAAVAPSSDKAADLLQNLSLDSEPQTIGVPEPAKKNGPAFSTGAAKGMNKPFNPNASFVPNGYPSTAYYYGGYEGQGDWNMYSRYMNLDGGMPQGVYGDSFSYMYNQGGYGYTPYGAYPPPTSSSPTIQHDGQLYGMQQYHYPCSYYQSPASADMSLASNKISVPQGGISSAVNAGHVPSSNLMNKGNAVSVANADCSDKNGLNAFLQSTHHTFLNSNGSYQGASLPASVPLSGHQGPRISTHGPQSAVPSDLSLISDRQFKHGAKVGLSSPVAPVKDLTTQRNQRLPHPLPQFTNLHGSQNPTGLDLVSGFMNRMYPSNRMYSQYANTLRANSHFGSSAYGSRTGFVDYKLKATGDGYGVDLLKKNIDGFGEMNKGPRASKSSDNKSVKSLGPVTLLLKGQDLPVKSDSDNKEVLQVPNKEQYNGESFSENYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKLGGCPIFLLFSVNTSGQFVGLAEMMGPVDFGKTVEYWQQDRWTGCFAVKWHVIKDIPNSVLRHITLENNENRPVTNSRDTQEVKLEKGIQIAKIFKEHSSETCILDDFGFYEAREKATQERKSNEQQLAKQVSKPGDLTIGSVLLPKTLDGTLLNGSATADTAEGRVKAEELLEGSGATTALEDPSKSC* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1948 667 Pfam YT521-B-like domain 436 574 IPR007275 GO:0003723
Dod01g1948 667 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 667 IPR045168 -
Dod01g1948 667 Coils Coil 592 612 - -
Dod01g1948 667 Gene3D ph1033 like domains 413 587 - -
Dod01g1948 667 MobiDBLite consensus disorder prediction 18 46 - -
Dod01g1948 667 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 1 667 - -
Dod01g1948 667 ProSiteProfiles YTH domain profile. 436 573 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1948 Dod-Chr1 54730434 54734522 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1948 - K20102 gmx:100818027 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1948 01 54730434 54734522 Dod01g1948 01 54730434 54734522 ECH