Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1946 ATGGGCAAAAATCTCAGCCCGGTGATGCAGCAAGAGCTGGCAAATCTTGACAAGGATCCAGATAGTCGCAAATATGCCATGAAAGCTTTGAAGTCATACCTGAAGGATATGGATTCAATGGCCATTCCTGTGTTTCTTGAGAAAGTTTCCGAGACGAAGGAAACTGGTTCTTTGTCCGGTGAATTCACAATTTCACTCTACGAGGTCCTTGCAAGGGTTCATGGTGTCAAGATTGTCCCCATGATAGACAGCATTATGGGGTCTGTGGTGCAGACCTTAGCTTCAAGTGCAGGGTCCTTCCCTCTTCACCAGGCTTGCTCAAAGGTGGTTCCAGCGATTGCGAGGTATGGAATTGATCCCACAGTCCCAGAAGATAAGAAGAGGCAAATCATTTATTCCATTTGCAAACCTCTCTCTGATTCCCTCTCAAGTTCTCAAGAGAGCTTAACTTCTGGTGCTGCCCTTTGCCTAAAGGCTCTGGTGGATTCGGATAATTGGAGGTTTGCTTCGGATGAAATGGTTAACCGGGTTTGCCAGAATGTTGCCGTGGCATTGGAGGGAAAGTCTGCTCAAACCAATTCTCACATGGGTCTTGTCATGTCTCTGGCCAAGCGCAATGCTTTGATTGTCGAGGCCTATGCTAGGTTGCTCATACAATCTGGATTGAGAATACTGAATGCTGGCCATGTGGAGAGGAATTCTCATAAGAGGCTGTCTGCCATTCAGATGGTGAACGTCTTGATGAAGTGTTTGGACCCCAGGAGCATATTTTCTGAGCTTGAATTGATAATTGAGGAGATGGAGAAGTGCCAGTCTGACAAAATGGCATTTGTCAAAGGTGCAGCATTTGAAGCTTTGCAAACTGCGAAGAGAATTGCTATTGACAAGAAGCCAAAATATCTGAAGAGTCCTGCTTCAGTGACAGGCTCAAATTTTAGTAGGAGTGATTTTATGGAGGGAGAAAATATTTCTGGCGATGGAGACCATTCTCCTGAATCTGGCTCGCCAGAATCATGTACCTTGGACTTTTTCCCTGGTTATGAATCTGTTGTTGAGTCTTCCATTTCAACAGGTTGGTATTCTCAGAACTCAGACTATGAGCGGAGGAGTGTGAATAGGAAGCTTTGGAGTCAGGAAAATGGAGGAGTTGATGTGTCTCTCAAGGATGGTTTGTTTTCAAGAGCAGGACAGGAGAGTCCTTTGTTGGAGCACTCTGGAAGTCATGAGTTTCCTAGTGGAAAAGGAGATCTAATGGAGGAATTTTCTGGTTTCATGCCCAGAAATCCTATGAATCGAGTATCCAAAAGTACCACAACAAGTCCACTAAGGTCACGCTCGCAGGTCATGGTTGACAGGATTAATATCTTCGAGACCCCAAGGAAGCTCATTCAATCACTTCAAGATCCAAATGATGTTTCTCCAGGTTGCTCTGAGAAACGGAATAGGAGGTTCAGGAGTCTATCCTCAGGCAATATTGAGTGGAGCCCAACATCTAAATACGACCAAAATGGTTTATCAGATCATGTGAACTGTGATTGTGAAGTTAATGTAAGTAATGGGGAGTTTGAAGGCGACTATGAATCAGTCTCATCAACGGATGATCTTCCCGGAGATGCTGATATGATGCCTACCAAAGTGGTTCCTGAAAATCAATTTGTTGTGCAAACTGATCCTAAGGGAAAAACACTTAACAAGACTAGATGTAAATTGCTTTGTGGCCTTTCATTCGCTCTTCTTGCAATGGCCACTCCTTTACTCTGGATCAATAGTCAGGATGAAGGCCATTATCTTGTCCCCACGTAA 1803 0.4437 MGKNLSPVMQQELANLDKDPDSRKYAMKALKSYLKDMDSMAIPVFLEKVSETKETGSLSGEFTISLYEVLARVHGVKIVPMIDSIMGSVVQTLASSAGSFPLHQACSKVVPAIARYGIDPTVPEDKKRQIIYSICKPLSDSLSSSQESLTSGAALCLKALVDSDNWRFASDEMVNRVCQNVAVALEGKSAQTNSHMGLVMSLAKRNALIVEAYARLLIQSGLRILNAGHVERNSHKRLSAIQMVNVLMKCLDPRSIFSELELIIEEMEKCQSDKMAFVKGAAFEALQTAKRIAIDKKPKYLKSPASVTGSNFSRSDFMEGENISGDGDHSPESGSPESCTLDFFPGYESVVESSISTGWYSQNSDYERRSVNRKLWSQENGGVDVSLKDGLFSRAGQESPLLEHSGSHEFPSGKGDLMEEFSGFMPRNPMNRVSKSTTTSPLRSRSQVMVDRINIFETPRKLIQSLQDPNDVSPGCSEKRNRRFRSLSSGNIEWSPTSKYDQNGLSDHVNCDCEVNVSNGEFEGDYESVSSTDDLPGDADMMPTKVVPENQFVVQTDPKGKTLNKTRCKLLCGLSFALLAMATPLLWINSQDEGHYLVPT* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1946 600 Gene3D - 2 313 IPR011989 -
Dod01g1946 600 PANTHER PROTEIN SINE1 1 600 - -
Dod01g1946 600 MobiDBLite consensus disorder prediction 429 444 - -
Dod01g1946 600 PANTHER GEMIN2 1 600 - -
Dod01g1946 600 MobiDBLite consensus disorder prediction 312 338 - -
Dod01g1946 600 MobiDBLite consensus disorder prediction 424 444 - -
Dod01g1946 600 SUPERFAMILY ARM repeat 13 291 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1946 Dod-Chr1 54723590 54726795 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1946 - - cam:101511812 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1946 01 54723590 54726795 Dod01g1946 01 54723590 54726795 ECH
Dod01g1946 01 54723590 54726795 Dod02g2037 02 37752395 37755761 PCT